RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 MAFIPQ8WZ33 124 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 FBXW5Q969U6 566 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 OR5B2Q96R09 309 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 WDR77Q9BQA1 342 aaPredicted RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 EVA1AQ9H8M9 152 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF304Q9HCX3 659 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SLC2A4RGQ9NR83 387 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SERINC1Q9NRX5 453 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SUSD2Q9UGT4 822 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 RHBDD3Q9Y3P4 386 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 A0A0D9SG52 128 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 SPTY2D1-AS1A0A0U1RR47 76 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 FAM221BA6H8Z2 402 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 A8MVM7 634 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 TGFBR3LH3BV60 316 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 SDCBPO00560 298 aaPredicted RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 ZNF254O75437 659 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 UPK3AO75631 287 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 WNT11O96014 354 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 ERCC1P07992 297 aaPredicted RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 GLI4P10075 376 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 RAB3AP20336 220 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 POLR2HP52434 150 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 EPHA4P54764 986 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 OR1D5P58170 312 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 UBE2IP63279 158 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 CSNK2A1P68400 391 aaPredicted RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 MRPS21P82921 87 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 DLX2Q07687 328 aaPredicted RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 MFGE8Q08431 387 aaPredicted RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 CSNK2A3Q8NEV1 391 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 OR5D14Q8NGL3 314 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 OR5H2Q8NGV7 314 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 OR4K15Q8NH41 348 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 STOML3Q8TAV4 291 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CTHRC1Q96CG8 243 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 LRRC61Q9BV99 259 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 NUDT9Q9BW91 350 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 ZNF416Q9BWM5 594 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PARP12Q9H0J9 701 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 HEXA-AS1Q9H8Q6 139 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 GPR160Q9UJ42 338 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CA14Q9ULX7 337 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 ICAM5Q9UMF0 924 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 YBX2Q9Y2T7 364 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 IGKV1D-42A0A075B6H8 117 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 RPS10-NUDT3A0A1W2PQS6 291 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PLSCR5A0PG75 271 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 H3BUI4 141 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 SNAPC5O75971 98 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PNPP00491 289 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 ZNF806P0C7X5 589 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CPN1P15169 458 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 ZP3P21754 424 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CD38P28907 300 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 ZNF93P35789 620 aaPredicted RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 RBMXP38159 391 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 CAPZBP47756 277 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 LBX1P52954 281 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 ATP1B3P54709 279 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CLDN6P56747 220 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 SNTB1Q13884 538 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 FZD2Q14332 565 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 MEF2DQ14814 521 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CHRFAM7AQ494W8 412 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 FAM76BQ5HYJ3 339 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CDC20BQ86Y33 519 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 OR52N5Q8NH56 324 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 OR51E1Q8TCB6 317 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 MARCH1Q8TCQ1 289 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 ELP5Q8TE02 316 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 TOMM40LQ969M1 308 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PNPLA2Q96AD5 504 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PGAM5Q96HS1 289 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CFHR5Q9BXR6 569 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 H0YIG0 161 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 M0R036 132 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 TLX3O43711 291 aaPredicted RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 IL33O95760 270 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 CSTBP04080 98 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 S100A9P06702 114 aaKnown RBP4.27□□□□□ -1.73
USP44-201ENST00000258499 ZNF43P17038 809 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 SERPINA2P20848 420 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 KIR3DL2P43630 455 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 HNRNPKP61978 463 aaKnown RBP eCLIP4.27□□□□□ -1.73
USP44-201ENST00000258499 PPP1R1AQ13522 171 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 GGTLC2Q14390 218 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 MFSD13AQ14CX5 517 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 STPG1Q5TH74 334 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PRAMEF20Q5VT98 475 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 LANCL3Q6ZV70 420 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 FAM57BQ71RH2 274 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 SLC22A18ASQ8N1D0 253 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 PRSS35Q8N3Z0 413 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 ZSCAN1Q8NBB4 408 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 OR51T1Q8NGJ9 327 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 STK35Q8TDR2 534 aa4.27□□□□□ -1.73
USP44-201ENST00000258499 GPBAR1Q8TDU6 330 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms