RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 PRKACAP17612 351 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 FAPQ12884 760 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 OR51F2Q8NH61 342 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 WDR34Q96EX3 536 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 PLA2G2FQ9BZM2 168 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 SHPKQ9UHJ6 478 aa17.23■□□□□ 0.35
PTPRE-201ENST00000254667 CSF3P09919 207 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 METAP1P53582 386 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 SLC17A1Q14916 467 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 CDK5R1Q15078 307 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 OR2V1Q8NHB1 315 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 CRLF2Q9HC73 371 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 FABP7O15540 132 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 NPY4RP50391 375 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 EDDM3AQ14507 147 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 FCN2Q15485 313 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 HMGN3Q15651 99 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 KIRREL2Q6UWL6 708 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 SVBPQ8N300 66 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 GPBAR1Q8TDU6 330 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 BANF2Q9H503 90 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 COPS3Q9UNS2 423 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 YBX2Q9Y2T7 364 aaKnown RBP17.22■□□□□ 0.35
PTPRE-201ENST00000254667 AADACP22760 399 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 CCR6P51684 374 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 HNF4GQ14541 408 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 KCNIP4Q6PIL6 250 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 ANKRD61A6NGH8 418 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 SH2D1BO14796 132 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 DFFBO76075 338 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 TRAPPC2P0DI81 140 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 TRAPPC2BP0DI82 140 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 OMGP23515 440 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 PRSS36Q5K4E3 855 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 KANSL1Q7Z3B3 1105 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 SLC51BQ86UW2 128 aa17.22■□□□□ 0.35
PTPRE-201ENST00000254667 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 DHHO43323 396 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 GPX5O75715 221 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 BAXQ07812 192 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 GABRG3Q99928 467 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 GPR84Q9NQS5 396 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 NKX2-2O95096 273 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 FOXF1Q12946 379 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 DEFB109BQ30KR1 87 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 LSRQ86X29 649 aaPredicted RBP17.21■□□□□ 0.35
PTPRE-201ENST00000254667 RBMXL3Q8N7X1 1067 aaKnown RBP17.21■□□□□ 0.35
PTPRE-201ENST00000254667 RNF141Q8WVD5 230 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 MED29Q9NX70 200 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 ATPIF1Q9UII2 106 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 SLCO1B1Q9Y6L6 691 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 APOA2P02652 100 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 SLC35G3Q8N808 338 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 CHST2Q9Y4C5 530 aa17.21■□□□□ 0.35
PTPRE-201ENST00000254667 ZNF891A8MT65 544 aaPredicted RBP17.21■□□□□ 0.34
PTPRE-201ENST00000254667 CT45A6P0DMU7 189 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 CT45A5P0DMU8 189 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 CT45A7P0DMV0 189 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 CT45A8P0DMV1 189 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 CT45A9P0DMV2 189 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 CT45A2Q5DJT8 189 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 CT45A1Q5HYN5 189 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 CORO6Q6QEF8 472 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 TMEM200AQ86VY9 491 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 CT45A3Q8NHU0 189 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 NUDT9Q9BW91 350 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 SERGEFQ9UGK8 458 aa17.21■□□□□ 0.34
PTPRE-201ENST00000254667 HRO43593 1189 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 NRASP01111 189 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 LAIR1Q6GTX8 287 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 USP51Q70EK9 711 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 FJX1Q86VR8 437 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 OR5AS1Q8N127 324 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 ZC3HAV1LQ96H79 300 aaKnown RBP17.2■□□□□ 0.34
PTPRE-201ENST00000254667 RAD52P43351 418 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 HCCSP53701 268 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 ASAH1Q13510 395 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 PCK2Q16822 640 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 CISD2Q8N5K1 135 aaKnown RBP17.2■□□□□ 0.34
PTPRE-201ENST00000254667 OR51S1Q8NGJ8 323 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 OPA3Q9H6K4 179 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 HEYLQ9NQ87 328 aaPredicted RBP17.2■□□□□ 0.34
PTPRE-201ENST00000254667 EXOSC3Q9NQT5 275 aaKnown RBP17.2■□□□□ 0.34
PTPRE-201ENST00000254667 BTBD17A6NE02 478 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 SLC22A20A6NK97 555 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 EBPQ15125 230 aaKnown RBP17.2■□□□□ 0.34
PTPRE-201ENST00000254667 CST9LP1Q5W188 147 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 SLC39A9Q9NUM3 307 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 KCNE1BA0A087WTH5 132 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 C5orf49A4QMS7 147 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 FITM1A5D6W6 292 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 C1orf87Q8N0U7 546 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 SLC38A9Q8NBW4 561 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 OR1S2Q8NGQ3 325 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 SIGLEC11Q96RL6 698 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 TMEM43Q9BTV4 400 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 PBOV1Q9GZY1 135 aa17.2■□□□□ 0.34
PTPRE-201ENST00000254667 A0A087WUJ7 227 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 MBTPS2O43462 519 aa17.19■□□□□ 0.34
PTPRE-201ENST00000254667 CNR1P21554 472 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms