RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 TUBG2Q9NRH3 451 aa13.84□□□□□ -0.19
CLPP-201ENST00000245816 KIF17Q9P2E2 1029 aa13.84□□□□□ -0.19
CLPP-201ENST00000245816 FZR1Q9UM11 496 aa13.84□□□□□ -0.19
CLPP-201ENST00000245816 FKBP7Q9Y680 259 aa13.84□□□□□ -0.19
CLPP-201ENST00000245816 NDUFS8O00217 210 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 BHLHE40O14503 412 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 LMX1BO60663 402 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 FAM157CP0CG43 387 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 ANXA8P13928 327 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 DAOP14920 347 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 ZNF250P15622 560 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 HIST1H1CP16403 213 aaKnown RBP13.83□□□□□ -0.2
CLPP-201ENST00000245816 COL8A2P25067 703 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 SELENOVP59797 346 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 AQP6Q13520 282 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 MAD2L1BPQ15013 274 aaPredicted RBP13.83□□□□□ -0.2
CLPP-201ENST00000245816 MOGQ16653 247 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 TMEM255AQ5JRV8 349 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 ELFN2Q5R3F8 820 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 ZBTB46Q86UZ6 589 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 LNX2Q8N448 690 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 IPCEF1Q8WWN9 437 aaPredicted RBP13.83□□□□□ -0.2
CLPP-201ENST00000245816 NEU4Q8WWR8 484 aaPredicted RBP13.83□□□□□ -0.2
CLPP-201ENST00000245816 PIMREGQ9BSJ6 248 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 ZNF416Q9BWM5 594 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 EIF3KQ9UBQ5 218 aaKnown RBP13.83□□□□□ -0.2
CLPP-201ENST00000245816 ATPIF1Q9UII2 106 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 GPR160Q9UJ42 338 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 NDRG4Q9ULP0 352 aaKnown RBP13.83□□□□□ -0.2
CLPP-201ENST00000245816 OAZ3Q9UMX2 235 aa13.83□□□□□ -0.2
CLPP-201ENST00000245816 H3BSA7 217 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 WNT9BO14905 357 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 SYNGR3O43761 229 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 HPXP02790 462 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 TACSTD2P09758 323 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 CCL2P13500 99 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 APEX1P27695 318 aaKnown RBP13.82□□□□□ -0.2
CLPP-201ENST00000245816 ALDH3B1P43353 468 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 GDI2P50395 445 aaKnown RBP13.82□□□□□ -0.2
CLPP-201ENST00000245816 GLO1Q04760 184 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 RGS7BPQ6MZT1 257 aaPredicted RBP13.82□□□□□ -0.2
CLPP-201ENST00000245816 LEG1Q6P5S2 330 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 ARL9Q6T311 187 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 ZNF786Q8N393 782 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 NPEPL1Q8NDH3 523 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 C11orf40Q8WZ69 217 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 NMNAT3Q96T66 252 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 DDOQ99489 341 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 SYT3Q9BQG1 590 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 WNT5BQ9H1J7 359 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 B9D1Q9UPM9 204 aa13.82□□□□□ -0.2
CLPP-201ENST00000245816 COA3Q9Y2R0 106 aaPredicted RBP13.82□□□□□ -0.2
CLPP-201ENST00000245816 IGLV3-9A0A075B6K5 115 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 LOC100509620A0A075B734 347 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 IGLV1-36A0A0B4J1U3 117 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 LOC100289279A0A1B0GTE1 492 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 PHF1O43189 567 aaPredicted RBP13.81□□□□□ -0.2
CLPP-201ENST00000245816 NCR1O76036 304 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 CLPTM1O96005 669 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 SCG5P05408 212 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 ERVS71-1P61550 626 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 KRTAP24-1Q3LI83 254 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 SLC36A3Q495N2 470 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 FAM120AOSQ5T036 256 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 OR6V1Q8N148 313 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 DNAJC9Q8WXX5 260 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 YIPF5Q969M3 257 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 C1orf159Q96HA4 380 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 CIB1Q99828 191 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 NIPSNAP1Q9BPW8 284 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 EGLN3Q9H6Z9 239 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 CHODLQ9H9P2 273 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 ELOVL3Q9HB03 270 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 SLCO1C1Q9NYB5 712 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 CDC42EP3Q9UKI2 254 aa13.81□□□□□ -0.2
CLPP-201ENST00000245816 RNF212BA8MTL3 300 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 J3QW42 95 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 M0R233 179 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 SGCEO43556 437 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 GZMKP49863 264 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 HIST1H3AP68431 136 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 ZNF362Q5T0B9 420 aaPredicted RBP13.8□□□□□ -0.2
CLPP-201ENST00000245816 HIST2H3PS2Q5TEC6 136 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 UGT2A3Q6UWM9 527 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 ZBTB49Q6ZSB9 765 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 HIST2H3AQ71DI3 136 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 GJC3Q8NFK1 279 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 OR2T33Q8NG76 320 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 OR52E2Q8NGJ4 325 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 OR4K13Q8NH42 304 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 AKR7LQ8NHP1 331 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 SYNPRQ8TBG9 265 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 GTF3AQ92664 365 aaKnown RBP13.8□□□□□ -0.2
CLPP-201ENST00000245816 EME1Q96AY2 570 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 COG8Q96MW5 612 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 DCLRE1CQ96SD1 692 aaKnown RBP13.8□□□□□ -0.2
CLPP-201ENST00000245816 C9orf16Q9BUW7 83 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 TSSK6Q9BXA6 273 aa13.8□□□□□ -0.2
CLPP-201ENST00000245816 SRA1Q9HD15 236 aaKnown RBP13.8□□□□□ -0.2
CLPP-201ENST00000245816 TBCCD1Q9NVR7 557 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms