RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 A1L4Q6 167 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 ACOD1A6NK06 481 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 OR4C45A6NMZ5 311 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 PRR32B1ATL7 298 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 ZNF593O00488 134 aaPredicted RBP7.03□□□□□ -1.28
CXCR4-201ENST00000241393 TSPAN2O60636 221 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 BGLAPP02818 100 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 OR8G3PP0DMU2 310 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 PGCP20142 388 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 PSMB1P20618 241 aaKnown RBP7.03□□□□□ -1.28
CXCR4-201ENST00000241393 IL12BP29460 328 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 CCR4P51679 360 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 ART1P52961 327 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 PNLIPRP2P54317 469 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 GFERP55789 205 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 SUMO2P61956 95 aaKnown RBP7.03□□□□□ -1.28
CXCR4-201ENST00000241393 EBPQ15125 230 aaKnown RBP7.03□□□□□ -1.28
CXCR4-201ENST00000241393 SGCBQ16585 318 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 GXYLT1Q4G148 440 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 C4orf46Q504U0 113 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 MESTQ5EB52 335 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 C6orf183Q5T699 404 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 APOOLQ6UXV4 268 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 STAC2Q6ZMT1 411 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 LINGO2Q7L985 606 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 LRRTM1Q86UE6 522 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 KMT5CQ86Y97 462 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 OR6V1Q8N148 313 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 GATSQ8NAP1 163 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 OR11H7Q8NGC8 314 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 OR2G2Q8NGZ5 317 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 OR6S1Q8NH40 331 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 GPR148Q8TDV2 347 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 FCAMRQ8WWV6 532 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 PHF21AQ96BD5 680 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 KTI12Q96EK9 354 aaPredicted RBP7.03□□□□□ -1.28
CXCR4-201ENST00000241393 TSPAN32Q96QS1 320 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 INTS14Q96SY0 518 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 HRASLSQ9HDD0 168 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 PNO1Q9NRX1 252 aaKnown RBP7.03□□□□□ -1.28
CXCR4-201ENST00000241393 B3GNT2Q9NY97 397 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 SLCO1C1Q9NYB5 712 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 OR5V1Q9UGF6 321 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 LAMP5Q9UJQ1 280 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 FOXJ3Q9UPW0 622 aa7.03□□□□□ -1.28
CXCR4-201ENST00000241393 LAMA3Q16787 3333 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 COL5A1P20908 1838 aaPredicted RBP7.02□□□□□ -1.29
CXCR4-201ENST00000241393 A0A1B0GVT2 93 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 ANKRD20A5PA0PJZ0 165 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 OR2W5A6NFC9 320 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 XKRYO14609 159 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 GPR171O14626 319 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 ICOSLGO75144 302 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 NPIPB7O75200 414 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 IGHMP01871 453 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 GP1BBP13224 206 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 CXCR1P25024 350 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 PTH2RP49190 550 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF117Q03924 483 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 CBFBQ13951 182 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 TOMM20Q15388 145 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 COL28A1Q2UY09 1125 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 TMEM69Q5SWH9 247 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 HES5Q5TA89 166 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 METTL11BQ5VVY1 283 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 UTS2BQ765I0 119 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 FCRLAQ7L513 359 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 MISPQ8IVT2 679 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 DND1Q8IYX4 353 aaKnown RBP7.02□□□□□ -1.29
CXCR4-201ENST00000241393 METTL27Q8N6F8 245 aaPredicted RBP7.02□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF433Q8N7K0 673 aaPredicted RBP7.02□□□□□ -1.29
CXCR4-201ENST00000241393 OTOSQ8NHW6 89 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF431Q8TF32 576 aaPredicted RBP7.02□□□□□ -1.29
CXCR4-201ENST00000241393 GIMAP1Q8WWP7 306 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 SNAPC3Q92966 411 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 TAAR8Q969N4 342 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 C4orf45Q96LM5 186 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 OR8D2Q9GZM6 311 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 C20orf85Q9H1P6 137 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 SLC17A5Q9NRA2 495 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 TAS2R8Q9NYW2 309 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 SCP2D1Q9UJQ7 156 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF346Q9UL40 294 aaKnown RBP7.02□□□□□ -1.29
CXCR4-201ENST00000241393 CLEC4AQ9UMR7 237 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 KLHDC2Q9Y2U9 406 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 SLCO1B1Q9Y6L6 691 aa7.02□□□□□ -1.29
CXCR4-201ENST00000241393 C5orf42Q9H799 3197 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 A6NL46 340 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 IDSB3KWA1 339 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 HCRTR2O43614 444 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 NUDT21O43809 227 aaKnown RBP7.01□□□□□ -1.29
CXCR4-201ENST00000241393 OR2T1O43869 369 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 SLC25A12O75746 678 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 MT-ND4P03905 459 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 IL5P05113 134 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 TPOP07202 933 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 ANKRD34CP0C6C1 535 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 CPN1P15169 458 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF24P17028 368 aa7.01□□□□□ -1.29
CXCR4-201ENST00000241393 ADRA2CP18825 462 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms