RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 C9orf170A2RU37 121 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 F12P00748 615 aaPredicted RBP8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 ZNF728P0DKX0 622 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 EPHA1P21709 976 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 SFTPDP35247 375 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 DHPSP49366 369 aaPredicted RBP8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 OR2A2Q6IF42 318 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 GLIPR1L1Q6UWM5 242 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 ZNF600Q6ZNG1 722 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 OR56B2PQ8NGI1 322 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 MS4A4AQ96JQ5 239 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 PATZ1Q9HBE1 687 aaKnown RBP8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 HAO2Q9NYQ3 351 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 AK3Q9UIJ7 227 aa8.68□□□□□ -1.02
NUDCD1-201ENST00000239690 DOCK5Q9H7D0 1870 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 TAF1LQ8IZX4 1826 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 CCDC163A0A0D9SF12 145 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 RAB27BO00194 218 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 TGM5O43548 720 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 EIF3GO75821 320 aaKnown RBP eCLIP8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 DUS4LO95620 317 aaKnown RBP8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 HPNP05981 417 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 HAAOP46952 286 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 SRPXP78539 464 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 COL19A1Q14993 1142 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 CST6Q15828 149 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 DEFB110Q30KQ9 67 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 EOGTQ5NDL2 527 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 OR51Q1Q8NH59 317 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 TMEM18Q96B42 140 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 SLC35B3Q9H1N7 401 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 METTL7AQ9H8H3 244 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 BCO1Q9HAY6 547 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 MARCH5Q9NX47 278 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 VSX1Q9NZR4 365 aaPredicted RBP8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 TNFSF18Q9UNG2 199 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 SLC22A13Q9Y226 551 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 ENTPD2Q9Y5L3 495 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 SPAG17Q6Q759 2223 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 A0A0U1RQK1 487 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 TCAPO15273 167 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 PPM1DO15297 605 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 RAB4AP20338 218 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 ITGB8P26012 769 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 ZNF84P51523 738 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 HTRA3P83110 453 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 EXOSC6Q5RKV6 272 aaKnown RBP8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 PRSS54Q6PEW0 395 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 TMEFF1Q8IYR6 380 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 DTWD2Q8NBA8 298 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 OR51A4Q8NGJ6 313 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 LIN37Q96GY3 246 aaPredicted RBP8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 TEX101Q9BY14 249 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 SLC17A9Q9BYT1 436 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 C1orf198Q9H425 327 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 ING1Q9UK53 422 aaPredicted RBP8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 PLEKHM1Q9Y4G2 1056 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 OR6C6A6NF89 314 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 ZFP92A6NM28 416 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 H7BYZ3 331 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 RNGTTO60942 597 aaKnown RBP8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 BPNT1O95861 308 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 ARG1P05089 322 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 CRHP06850 196 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 NFYBP25208 207 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 MELKQ14680 651 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 MOGAT2Q3SYC2 334 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 EMC4Q5J8M3 183 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 DCAF12L2Q5VW00 463 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 METRNLQ641Q3 311 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 RSPO2Q6UXX9 243 aaPredicted RBP8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 ARRDC1Q8N5I2 433 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 ZNF485Q8NCK3 441 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 NRIP2Q9BQI9 281 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 ZNF160Q9HCG1 818 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 DNAJB11Q9UBS4 358 aa8.67□□□□□ -1.02
NUDCD1-201ENST00000239690 A0A0A6YYC8 382 aaPredicted RBP8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 PRAMEF27A3QJZ7 478 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 OR5K4A6NMS3 321 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 I3L1I5 382 aaPredicted RBP8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 SNU13P55769 128 aaKnown RBP8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 MRPL58Q14197 206 aaKnown RBP8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 OR2B11Q5JQS5 317 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 CNKSR3Q6P9H4 555 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 OGFOD3Q6PK18 319 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 UEVLDQ8IX04 471 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 TVP23CQ96ET8 276 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 DEFB118Q96PH6 123 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 ALX4Q9H161 411 aaPredicted RBP8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 RAB18Q9NP72 206 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 GDF2Q9UK05 429 aaPredicted RBP8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 FLVCR1Q9Y5Y0 555 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 A0A0A6YYD5 115 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 MFNGO00587 321 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 OR2A4O95047 310 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 KLF8O95600 359 aaPredicted RBP8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 VSIG10L2P0DP72 767 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 NPBWR1P48145 328 aa8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 EIF4EBP2Q13542 120 aaPredicted RBP8.66□□□□□ -1.02
NUDCD1-201ENST00000239690 ATPAF1Q5TC12 328 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms