RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 RRAGCQ9HB90 399 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 FOXJ2Q9P0K8 574 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 RGPD2P0DJD1 1756 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3KA0A087X1G2 549 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3BA6NDS4 549 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3FA6NER0 549 aaPredicted RBP11.75□□□□□ -0.53
VAMP4-201ENST00000236192 NDUFS8O00217 210 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 ADH1BP00325 375 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 IGHA1P01876 353 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 GABRA3P34903 492 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 GPR18Q14330 331 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 TBC1D3GQ6DHY5 549 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 ANGPTL5Q86XS5 388 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 OR1P1Q8NH06 330 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 PHOSPHO2Q8TCD6 241 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 PRRX2Q99811 253 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 ELOVL3Q9HB03 270 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 MARCH5Q9NX47 278 aa11.75□□□□□ -0.53
VAMP4-201ENST00000236192 COLCA2A8K830 154 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 HMGN4O00479 90 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 CTNSO60931 367 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 STATHP02808 62 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 RAB28P51157 221 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 WNT3P56703 355 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF385BQ569K4 471 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 AMZ2Q86W34 360 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 TMEM104Q8NE00 496 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 OR5D14Q8NGL3 314 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 KLK6Q92876 244 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF845Q96IR2 970 aaPredicted RBP11.74□□□□□ -0.53
VAMP4-201ENST00000236192 TNFRSF13CQ96RJ3 184 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 CXXC1Q9P0U4 656 aaPredicted RBP11.74□□□□□ -0.53
VAMP4-201ENST00000236192 KCNE5Q9UJ90 142 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 MMACHCQ9Y4U1 282 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 NPIPA5E9PKD4 350 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 VEGFDO43915 354 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 RPL34P49207 117 aaKnown RBP11.74□□□□□ -0.53
VAMP4-201ENST00000236192 SULT1A2P50226 295 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 TRA2BP62995 288 aaKnown RBP11.74□□□□□ -0.53
VAMP4-201ENST00000236192 IHHQ14623 411 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF707Q96C28 371 aaPredicted RBP11.74□□□□□ -0.53
VAMP4-201ENST00000236192 NPIPA1Q9UND3 350 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 DUSP1P28562 367 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 HRH1P35367 487 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 NKAIN3Q8N8D7 197 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 RASD2Q96D21 266 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 CTDSP1Q9GZU7 261 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 OR51B6Q9H340 312 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 SERINC1Q9NRX5 453 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 PIPOXQ9P0Z9 390 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 OSGIN2Q9Y236 505 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 TRAV34A0A0B4J273 112 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 SLC5A10A0PJK1 596 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 COX5BP10606 129 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 HSF1Q00613 529 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF92Q03936 586 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 CAMKMTQ7Z624 323 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 C10orf111Q8N326 155 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 CSNK1A1LQ8N752 337 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 DCAF4L2Q8NA75 395 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 ZDHHC11Q9H8X9 412 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 PELI2Q9HAT8 420 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 Q9N2J8 555 aa11.74□□□□□ -0.53
VAMP4-201ENST00000236192 TFPIP10646 304 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 DHRS11Q6UWP2 260 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SOSTQ9BQB4 213 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 KCND3Q9UK17 655 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SMAD6O43541 496 aaKnown RBP11.73□□□□□ -0.53
VAMP4-201ENST00000236192 WNT11O96014 354 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 ARL4DP49703 201 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SRPXP78539 464 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 IKZF1Q13422 519 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 DNLZQ5SXM8 178 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF761Q86XN6 746 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-201ENST00000236192 OR2L13Q8N349 312 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 R3HDM4Q96D70 268 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SF3B6Q9Y3B4 125 aaKnown RBP11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SLC38A8A6NNN8 435 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 CHRNB4P30926 498 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 RAB32Q13637 225 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 OR51A4Q8NGJ6 313 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 TFGQ92734 400 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-201ENST00000236192 ZNF2Q9BSG1 426 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-201ENST00000236192 Q9N2K0 584 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 FBXL17Q9UF56 701 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 RHBDD3Q9Y3P4 386 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 LOXHD1Q8IVV2 1947 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 DRGXA6NNA5 263 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 BPNT1O95861 308 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 CT45A8P0DMV1 189 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 CT45A9P0DMV2 189 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 CTSAP10619 480 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 AGAP20933 346 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 SGCGQ13326 291 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 TESK1Q15569 626 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 CT45A2Q5DJT8 189 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 FBXO46Q6PJ61 603 aaPredicted RBP11.73□□□□□ -0.53
VAMP4-201ENST00000236192 DCXRQ7Z4W1 244 aa11.73□□□□□ -0.53
VAMP4-201ENST00000236192 RABEPKQ7Z6M1 372 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms