RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 P4HTMQ9NXG6 502 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 ALS2Q96Q42 1657 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 BHLHE40O14503 412 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 FZD6O60353 706 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 SRP9P49458 86 aaKnown RBP17.24■□□□□ 0.35
SMPD3-201ENST00000219334 NPY4RP50391 375 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF266Q14584 549 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 CLINT1Q14677 625 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 FAM74A1Q5RGS3 127 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF620Q6ZNG0 422 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 TMEM217Q8N7C4 229 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 NT5CQ8TCD5 201 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 SLC35E1Q96K37 410 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 TXNIPQ9H3M7 391 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 TAS2R4Q9NYW5 299 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 CTSFQ9UBX1 484 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 A0A0B4J2A0 478 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 AGAP14A8MT82 685 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 PIGAP37287 484 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF766Q5HY98 468 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 LAIR1Q6GTX8 287 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 ASTLQ6HA08 431 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-201ENST00000219334 TMEM102Q8N9M5 508 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-201ENST00000219334 RDH5Q92781 318 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 TXN2Q99757 166 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 SAMD10Q9BYL1 202 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 ARV1Q9H2C2 271 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 ACER3Q9NUN7 267 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 SHPKQ9UHJ6 478 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 F5P12259 2224 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 DHHO43323 396 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 CPEP16870 476 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 TRIP6Q15654 476 aaKnown RBP17.23■□□□□ 0.35
SMPD3-201ENST00000219334 CYHR1Q6ZMK1 362 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 KIAA1958Q8N8K9 716 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 OR5M9Q8NGP3 310 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 GAB3Q8WWW8 586 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 SLC25A21Q9BQT8 299 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-201ENST00000219334 ZCCHC4Q9H5U6 513 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 RAF1P04049 648 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 GPR12P47775 334 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 RTL8BQ17RB0 113 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 CDONQ4KMG0 1287 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 FAM213BQ8TBF2 198 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 S1PR5Q9H228 398 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 PTTG3PQ9NZH4 202 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 KCNG2Q9UJ96 466 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 FZD2Q14332 565 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 OR1S2Q8NGQ3 325 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 SUCNR1Q9BXA5 334 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 BCL2L10Q9HD36 194 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 FBXL2Q9UKC9 423 aa17.23■□□□□ 0.35
SMPD3-201ENST00000219334 TOGARAM1Q9Y4F4 1720 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 PRSS37A4D1T9 235 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 ANKRD61A6NGH8 418 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 SNRNP70P08621 437 aaKnown RBP17.22■□□□□ 0.35
SMPD3-201ENST00000219334 HLA-DOBP13765 273 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 SUMF1Q8NBK3 374 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 OR52N5Q8NH56 324 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 SSTR2P30874 369 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 DIO1P49895 249 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 HTRA4P83105 476 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-201ENST00000219334 EBPQ15125 230 aaKnown RBP17.22■□□□□ 0.35
SMPD3-201ENST00000219334 Q6ZRG5 221 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 ZFP82Q8N141 532 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 MZB1Q8WU39 189 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 FCRL1Q96LA6 429 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 GPR84Q9NQS5 396 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 TAS2R5Q9NYW4 299 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 ARRB2P32121 409 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 LILRA6Q6PI73 481 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 RPP25Q9BUL9 199 aaKnown RBP17.22■□□□□ 0.35
SMPD3-201ENST00000219334 PLA2G3Q9NZ20 509 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 FADS1O60427 444 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 FOXF1Q12946 379 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 FBXL14Q8N1E6 418 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 FBXO17Q96EF6 278 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 REEP6Q96HR9 211 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 PLA2G2FQ9BZM2 168 aa17.22■□□□□ 0.35
SMPD3-201ENST00000219334 TCEAL2Q9H3H9 227 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-201ENST00000219334 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 ACOT8O14734 319 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 OR10K1Q8NGX5 313 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 B4GALT1P15291 398 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 ELK1P19419 428 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 ZDHHC23Q8IYP9 409 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 C17orf50Q8WW18 174 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 CLEC2DQ9UHP7 191 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 OR6K3Q8NGY3 331 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF486Q96H40 463 aaPredicted RBP17.21■□□□□ 0.35
SMPD3-201ENST00000219334 MYH7BA7E2Y1 1941 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 TSPAN12O95859 305 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 OR10J4P0C629 311 aa17.21■□□□□ 0.35
SMPD3-201ENST00000219334 SAT2Q96F10 170 aaPredicted RBP17.21■□□□□ 0.35
SMPD3-201ENST00000219334 RBFOX1Q9NWB1 397 aaKnown RBP17.21■□□□□ 0.35
SMPD3-201ENST00000219334 DFFBO76075 338 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 NXPH3O95157 252 aa17.2■□□□□ 0.34
SMPD3-201ENST00000219334 APEX1P27695 318 aaKnown RBP17.2■□□□□ 0.34
SMPD3-201ENST00000219334 OR51A4Q8NGJ6 313 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms