RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 POU2F3Q9UKI9 436 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 PCDHGB1Q9Y5G3 927 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 HECTD1Q9ULT8 2610 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 OR6C6A6NF89 314 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 LYNP07948 512 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 SBK2P0C263 348 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 APEX1P27695 318 aaKnown RBP17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 SLC15A1P46059 708 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 NUDT6P53370 316 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 TAF13Q15543 124 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 CFAP77Q6ZQR2 320 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 CNIH3Q8TBE1 160 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 RNFT2Q96EX2 444 aa17.53■□□□□ 0.4
RHBDD3-201ENST00000216085 IRGMA1A4Y4 181 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 ZNF878C9JN71 531 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 CCNOP22674 350 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 ACTC1P68032 377 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 ACTA1P68133 377 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 CCDC92Q53HC0 331 aaPredicted RBP17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 KRT80Q6KB66 452 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 KCTD18Q6PI47 426 aaPredicted RBP17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 TMEM200AQ86VY9 491 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 SLC35F2Q8IXU6 374 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 CPEB3Q8NE35 698 aaKnown RBP17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 THEM6Q8WUY1 208 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 APH1BQ8WW43 257 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 ASB17Q8WXJ9 295 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 MYCBPQ99417 103 aaPredicted RBP17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 AASSQ9UDR5 926 aa17.52■□□□□ 0.4
RHBDD3-201ENST00000216085 PRR14LQ5THK1 2151 aa17.52■□□□□ 0.39
RHBDD3-201ENST00000216085 BAHCC1Q9P281 2608 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 C5orf49A4QMS7 147 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 SYNGR3O43761 229 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 DBTP11182 482 aaKnown RBP17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 MYF6P23409 242 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 ZNF91Q05481 1191 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 RHOUQ7L0Q8 258 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 CDC20BQ86Y33 519 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 OR4F15Q8NGB8 312 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 SPTSSAQ969W0 71 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 SLAMF6Q96DU3 332 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 MAP6Q96JE9 813 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 COPS4Q9BT78 406 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 ABHD6Q9BV23 337 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 EIF3KQ9UBQ5 218 aaKnown RBP17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 CENPEQ02224 2701 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 IGHV2OR16-5A0A0B4J2B6 119 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 ZNF670-ZNF695F2Z2N8 137 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 WBP4O75554 376 aaKnown RBP17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 GRB2P62993 217 aaKnown RBP17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 TLE4Q04727 773 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 KLHL22Q53GT1 634 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 ADAM5Q6NVV9 412 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 MYPOPQ86VE0 399 aaPredicted RBP17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 ST7LQ8TDW4 575 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 DCLRE1CQ96SD1 692 aaKnown RBP17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 CLEC4MQ9H2X3 399 aaPredicted RBP17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 CENPMQ9NSP4 180 aa17.51■□□□□ 0.39
RHBDD3-201ENST00000216085 SIAH2O43255 324 aa17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 CTAG2O75638 210 aa17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 FADS2O95864 444 aaKnown RBP17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 OR2T7P0C7T2 308 aa17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 RAB40BQ12829 278 aa17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 CDK5R2Q13319 367 aa17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 ZNF704Q6ZNC4 412 aaPredicted RBP17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 OR10H4Q8NGA5 316 aa17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 OR2T27Q8NH04 317 aa17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 POM121L2Q96KW2 1035 aa17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 DDX28Q9NUL7 540 aaKnown RBP17.5■□□□□ 0.39
RHBDD3-201ENST00000216085 ATP6V1G2-DDX39BF2Z307 99 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 APOC1P02654 83 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 ALOX5APP20292 161 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 HSD11B1P28845 292 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 RPS23P62266 143 aaKnown RBP17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 CSNK2BP67870 215 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 RNF133Q8WVZ7 376 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 MRPL48Q96GC5 212 aaKnown RBP17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 CNBD2Q96M20 576 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 TMEM204Q9BSN7 226 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 ELOVL3Q9HB03 270 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 AMBNQ9NP70 447 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 ATP23Q9Y6H3 246 aa17.49■□□□□ 0.39
RHBDD3-201ENST00000216085 FAM221AA4D161 298 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 VSTM5A8MXK1 200 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 H2BFMP0C1H6 154 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 PSKH1P11801 424 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 CCL2P13500 99 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 ZNF35P13682 527 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 TPTEP56180 551 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 SPOCK1Q08629 439 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 KRT77Q7Z794 578 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 C1orf174Q8IYL3 243 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 KBTBD8Q8NFY9 601 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 FBLIM1Q8WUP2 373 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 HS3ST6Q96QI5 342 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 MROQ9BYG7 248 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 PNRC2Q9NPJ4 139 aaKnown RBP17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 APOL3O95236 402 aa17.48■□□□□ 0.39
RHBDD3-201ENST00000216085 ABHD16AO95870 558 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms