RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 RNPS1Q15287 305 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 MARCH8Q5T0T0 291 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SYT9Q86SS6 491 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SLC7A10Q9NS82 523 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 OR1A1Q9P1Q5 309 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 MUTYHQ9UIF7 546 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PPP1R3CQ9UQK1 317 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 GPR55Q9Y2T6 319 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 TMED7-TICAM2A0A0A6YYA0 188 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PHF1O43189 567 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 FPR3P25089 353 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SHHQ15465 462 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 KHDC1Q4VXA5 237 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 MED25Q71SY5 747 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ENDOVQ8N8Q3 282 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 OR1L4Q8NGR5 311 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 KCNG3Q8TAE7 436 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SYNPRQ8TBG9 265 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ADAMTS14Q8WXS8 1223 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 KTI12Q96EK9 354 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 TMEM19Q96HH6 336 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SMIM3Q9BZL3 60 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 GALPQ9UBC7 116 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 NOCTQ9UK39 431 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 TMED7Q9Y3B3 224 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 NUBP2Q9Y5Y2 271 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 K7ESF4 209 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SIRPB1O00241 398 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 BANF1O75531 89 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ARSAP15289 507 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 GPR4P46093 362 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ROM1Q03395 351 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 EXOSC7Q15024 291 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 HNRNPA1L2Q32P51 320 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 DPPA4Q7L190 304 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 NUFIP2Q7Z417 695 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 LYG2Q86SG7 212 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 WFDC3Q8IUB2 231 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TMBIM1Q969X1 311 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 A0A0A6YYJ9 748 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 AIFM1O95831 613 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CKMT2P17540 419 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 MC5RP33032 325 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ZNF85Q03923 595 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TOR2AQ5JU69 321 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 THSD4Q6ZMP0 1018 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 FAM219AQ8IW50 185 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 MRPL43Q8N983 215 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 SLC30A7Q8NEW0 376 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 Q8WTZ3 238 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CXorf58Q96LI9 332 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SIRT3Q9NTG7 399 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 KPTNQ9Y664 436 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 RPS27AP62979 156 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 UBA52P62987 128 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 CTBSQ01459 385 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 C12orf54Q6X4T0 127 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CANT1Q8WVQ1 401 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 DUX5Q96PT3 197 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 IL37Q9NZH6 218 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 NID1P14543 1247 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ACP1P24666 158 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 MPLP40238 635 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 DUSP2Q05923 314 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 HYAL1Q12794 435 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 B3GNT9Q6UX72 402 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 STPG3Q8N7X2 389 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 OR5A2Q8NGI9 324 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 OR52N5Q8NH56 324 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 DOK4Q8TEW6 326 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 C16orf92Q96LL3 132 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CXXC4Q9H2H0 198 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 RIMS3Q9UJD0 308 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 B3GALT5Q9Y2C3 310 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 BRWD3Q6RI45 1802 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 A0A087WZY1 265 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 UTS2O95399 124 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 MT-CO3P00414 261 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ATP4BP51164 291 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 FOXO1Q12778 655 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TTC32Q5I0X7 151 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SPANXN4Q5MJ08 99 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 WDR88Q6ZMY6 472 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 GDPGP1Q6ZNW5 385 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 DGAT2L6Q6ZPD8 337 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 LGI3Q8N145 548 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TMEM102Q8N9M5 508 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 GMPPAQ96IJ6 420 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 UQCC2Q9BRT2 126 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 BABAM2Q9NXR7 383 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CBY1Q9Y3M2 126 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 GNG7O60262 68 aa3.15□□□□□ -1.9
NEB-201ENST00000172853 SULT1A3P0DMM9 295 aa3.15□□□□□ -1.9
NEB-201ENST00000172853 SULT1A4P0DMN0 295 aa3.15□□□□□ -1.9
NEB-201ENST00000172853 TPPP2P59282 170 aa3.15□□□□□ -1.9
NEB-201ENST00000172853 SELENBP1Q13228 472 aa3.15□□□□□ -1.9
NEB-201ENST00000172853 FAM209BQ5JX69 171 aa3.15□□□□□ -1.9
NEB-201ENST00000172853 SSX9Q7RTT3 188 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms