RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PLPP5Q8NEB5 264 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 NRIP2Q9BQI9 281 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 PECRQ9BY49 303 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM38BQ9NVV0 291 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 DOK5Q9P104 306 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 HCFC2Q9Y5Z7 792 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 RGPD2P0DJD1 1756 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TSC2P49815 1807 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CLTCQ00610 1675 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 COLCA2A8K830 154 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TRAF3IP2O43734 574 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 GRAP2O75791 330 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ARRB2P32121 409 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 UBE2V2Q15819 145 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 HENMT1Q5T8I9 393 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LGALS14Q8TCE9 139 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SLC35A4Q96G79 324 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SNX22Q96L94 193 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 WDFY2Q96P53 400 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LINC00470Q9BZP3 86 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LPAR5Q9H1C0 372 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 HEXA-AS1Q9H8Q6 139 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CDH10Q9Y6N8 788 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 DNMT1P26358 1616 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 METP08581 1390 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TIMM8AO60220 97 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 STK16O75716 305 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CRYZQ08257 329 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CD47Q08722 323 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ACSM6Q6P461 480 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ENPP6Q6UWR7 440 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 GDPGP1Q6ZNW5 385 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TCF24Q7RTU0 167 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LGI4Q8N135 537 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LILRA2Q8N149 483 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 C2orf73Q8N5S3 287 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR6K2Q8NGY2 324 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 RGMAQ96B86 450 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SPAG8Q99932 426 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LMF2Q9BU23 707 aaKnown RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 NELFAQ9H3P2 528 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 GFRA2O00451 464 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SLC16A8O95907 504 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 HAND1O96004 215 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 TBC1D3HP0C7X1 549 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 PRKACGP22612 351 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ADORA2BP29275 332 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SRD5A2P31213 254 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 FUT7Q11130 342 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 PCLAFQ15004 111 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 NSDHLQ15738 373 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ZBTB6Q15916 424 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ZXDCQ2QGD7 858 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 DCAF4L1Q3SXM0 396 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 UNC50Q53HI1 259 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CPTPQ5TA50 214 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF776Q68DI1 518 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 B3GLCTQ6Y288 498 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 MOB3CQ70IA8 216 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 GPR26Q8NDV2 337 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 LFNGQ8NES3 379 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR1P1Q8NH06 330 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 OR2AE1Q8NHA4 323 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CYP2W1Q8TAV3 490 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 SDHCQ99643 169 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-209ENST00000639244 CCDC167Q9P0B6 97 aa3.92□□□□□ -1.78
SCN3A-209ENST00000639244 MBLAC1A4D2B0 266 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 LATO43561 262 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 LANCL1O43813 399 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 KITLGP21583 273 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 IL10RAQ13651 578 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SAXO2Q658L1 398 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 MBOAT2Q6ZWT7 520 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM163Q8TC26 289 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 HOXB13Q92826 284 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 MOB3AQ96BX8 217 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 LINC00615Q96LM1 132 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF358Q9NW07 568 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PIM2Q9P1W9 311 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CGGBP1Q9UFW8 167 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 FAM96BQ9Y3D0 163 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 GAGE12BA1L429 117 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SOCS2O14508 198 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ESR1P03372 595 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CREB1P16220 341 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 GATA4P43694 442 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ST3GAL4Q11206 333 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 GPR18Q14330 331 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 C6orf141Q5SZD1 244 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 AQP12AQ8IXF9 295 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PERPQ96FX8 193 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CLCC1Q96S66 551 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 AGPAT1Q99943 283 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 ANAPC13Q9BS18 74 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 PRRC2AP48634 2157 aaKnown RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 LOC102724200A0A096LPH7 203 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM269A0A1B0GVZ9 245 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 SLC1A7O00341 560 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 CTDSPLO15194 276 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 B4GALT5O43286 388 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms