RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TPOP07202 933 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 P2RX1P51575 399 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 GPR85P60893 370 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 C2orf76Q3KRA6 126 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 CORO6Q6QEF8 472 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 MFSD4AQ8N468 514 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 ZNF321PQ8N8H1 164 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 OR52B4Q8NGK2 314 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 GOT1L1Q8NHS2 421 aaPredicted RBP16.88■□□□□ 0.29
SCARB2-213ENST00000638680 NXPE3Q969Y0 559 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 KCNJ15Q99712 375 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 PRAMEF25A6NGN4 478 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 IL34Q6ZMJ4 242 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 BTLAQ7Z6A9 289 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 S100A7AQ86SG5 101 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 TCTE3Q8IZS6 198 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 FAM58AQ8N1B3 248 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 NAT6Q93015 286 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 INTS12Q96CB8 462 aaKnown RBP16.88■□□□□ 0.29
SCARB2-213ENST00000638680 PLEKHF2Q9H8W4 249 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 BCO1Q9HAY6 547 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 TRIM77I1YAP6 450 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 BCAT2O15382 392 aaPredicted RBP16.88■□□□□ 0.29
SCARB2-213ENST00000638680 ETHE1O95571 254 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 CD46P15529 392 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 CSNK1EP49674 416 aaKnown RBP16.88■□□□□ 0.29
SCARB2-213ENST00000638680 FAM219BQ5XKK7 198 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 LINC01465Q8N7H1 131 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 OPA3Q9H6K4 179 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 MED9Q9NWA0 146 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 DDX60Q8IY21 1712 aaKnown RBP16.88■□□□□ 0.29
SCARB2-213ENST00000638680 HS3ST1O14792 307 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 ICAM2P13598 275 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 ACKR3P25106 362 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 OR2B8PP59922 312 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 CDK5R1Q15078 307 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 STAC2Q6ZMT1 411 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 SYS1Q8N2H4 156 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 EMG1Q92979 244 aaKnown RBP16.88■□□□□ 0.29
SCARB2-213ENST00000638680 SLAMF6Q96DU3 332 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 TPPP3Q9BW30 176 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 SPNS1Q9H2V7 528 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 DYNLRB1Q9NP97 96 aa16.88■□□□□ 0.29
SCARB2-213ENST00000638680 OLFM2O95897 454 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 F10P00742 488 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 DCTDP32321 178 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 CXCL12P48061 93 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 CATSPERDQ86XM0 798 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 OR10J5Q8NHC4 309 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 PDE4DIPQ5VU43 2346 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 SNRPGP15A8MWD9 76 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 PPP5D1E7EU14 171 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 XRCC3O43542 346 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 HMGA1P17096 107 aaKnown RBP16.87■□□□□ 0.29
SCARB2-213ENST00000638680 CYHR1Q6ZMK1 362 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 LRFN5Q96NI6 719 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 ZBP1Q9H171 429 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 FGF20Q9NP95 211 aaPredicted RBP16.87■□□□□ 0.29
SCARB2-213ENST00000638680 FGF21Q9NSA1 209 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 MTCH1Q9NZJ7 389 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 IGHV3-20A0A0C4DH32 117 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 TARM1B6A8C7 271 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 ZNF587BE7ETH6 402 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 SDCBPO00560 298 aaPredicted RBP16.87■□□□□ 0.29
SCARB2-213ENST00000638680 FGF17O60258 216 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 RGS11O94810 467 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 HSD17B7P56937 341 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 HSF1Q00613 529 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 SLC25A35Q3KQZ1 300 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 ZFP62Q8NB50 900 aaPredicted RBP16.87■□□□□ 0.29
SCARB2-213ENST00000638680 OR2AK2Q8NG84 335 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 ORAI1Q96D31 301 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 SPHK1Q9NYA1 384 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 TLCD2A6NGC4 264 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
SCARB2-213ENST00000638680 IRS1P35568 1242 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.87■□□□□ 0.29
SCARB2-213ENST00000638680 ASTLQ6HA08 431 aaPredicted RBP16.87■□□□□ 0.29
SCARB2-213ENST00000638680 NECAP1Q8NC96 275 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 NEURL2Q9BR09 285 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 LRP5LA4QPB2 252 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 TMEM88Q6PEY1 159 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 CCDC190Q86UF4 302 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 TMEM123Q8N131 208 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 OR13H1Q8NG92 308 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 OR5M8Q8NGP6 311 aa16.87■□□□□ 0.29
SCARB2-213ENST00000638680 CROCCQ5TZA2 2017 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 GPR171O14626 319 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 PI3P19957 117 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 ACKR1Q16570 336 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 EMC4Q5J8M3 183 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 TEX261Q6UWH6 196 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 SMIM15Q7Z3B0 74 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 SKA3Q8IX90 412 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 FAM174AQ8TBP5 190 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 NUDCD2Q8WVJ2 157 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 FLVCR1Q9Y5Y0 555 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 U3KQ87 197 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 EFSO43281 561 aa16.86■□□□□ 0.29
SCARB2-213ENST00000638680 ZNF354AO60765 605 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms