RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CDC42EP2O14613 210 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 AHCYL1O43865 530 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 TIMM8AO60220 97 aaPredicted RBP15.61■□□□□ 0.09
CLN6-220ENST00000637450 PRSS23O95084 383 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 ABHD16AO95870 558 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 CD14P08571 375 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 ZNF26P17031 533 aaPredicted RBP15.61■□□□□ 0.09
CLN6-220ENST00000637450 TNFAIP6P98066 277 aaPredicted RBP15.61■□□□□ 0.09
CLN6-220ENST00000637450 LIPEQ05469 1076 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 ZBED5Q49AG3 693 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 ZNF730Q6ZMV8 503 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 TMPRSS11FQ6ZWK6 438 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 CBLL1Q75N03 491 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 ZNF771Q7L3S4 317 aaPredicted RBP15.61■□□□□ 0.09
CLN6-220ENST00000637450 ARPINQ7Z6K5 226 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 POU5F2Q8N7G0 328 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 RP9Q8TA86 221 aaKnown RBP15.61■□□□□ 0.09
CLN6-220ENST00000637450 SUCNR1Q9BXA5 334 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 DCAF16Q9NXF7 216 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 UBAP1Q9NZ09 502 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 GRHPRQ9UBQ7 328 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 ADAM18Q9Y3Q7 739 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 NPTNQ9Y639 398 aa15.61■□□□□ 0.09
CLN6-220ENST00000637450 PPIAL4EA0A075B759 164 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 PPIAL4CA0A0B4J2A2 164 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 PPIAL4DF5H284 164 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 CXCR6O00574 342 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 ZNF682O95780 498 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 FSHBP01225 129 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 IGHV2-70P01814 119 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 PPIAL4FP0DN26 164 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 GSTM3P21266 225 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 ZFP36P26651 326 aaKnown RBP15.6■□□□□ 0.09
CLN6-220ENST00000637450 RPL4P36578 427 aaKnown RBP15.6■□□□□ 0.09
CLN6-220ENST00000637450 LCN2P80188 198 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 SCRN3Q0VDG4 424 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 IFI44LQ53G44 452 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 FAM122BQ7Z309 247 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 TREML1Q86YW5 311 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 NPEPL1Q8NDH3 523 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 GCDHQ92947 438 aaPredicted RBP15.6■□□□□ 0.09
CLN6-220ENST00000637450 SAMD8Q96LT4 415 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 Q96M85 177 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 SLC6A7Q99884 636 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 RBM4Q9BWF3 364 aaKnown RBP15.6■□□□□ 0.09
CLN6-220ENST00000637450 PLA2G12AQ9BZM1 189 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 POFUT1Q9H488 388 aa15.6■□□□□ 0.09
CLN6-220ENST00000637450 PURGQ9UJV8 347 aaKnown RBP15.6■□□□□ 0.09
CLN6-220ENST00000637450 PRSS37A4D1T9 235 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 XKRYO14609 159 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 SGCEO43556 437 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 PTP4A3O75365 173 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 KITLGP21583 273 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 GPR4P46093 362 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 LIMS1P48059 325 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 HNRNPA0Q13151 305 aaKnown RBP15.59■□□□□ 0.09
CLN6-220ENST00000637450 MESTQ5EB52 335 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 Q6ZR03 302 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 FKBP9P1Q75LS8 142 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 VASH1Q7L8A9 365 aaPredicted RBP15.59■□□□□ 0.09
CLN6-220ENST00000637450 TSEN54Q7Z6J9 526 aaKnown RBP15.59■□□□□ 0.09
CLN6-220ENST00000637450 ST7LQ8TDW4 575 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 CMBLQ96DG6 245 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 HSH2DQ96JZ2 352 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 DCLRE1CQ96SD1 692 aaKnown RBP15.59■□□□□ 0.09
CLN6-220ENST00000637450 HOPXQ9BPY8 73 aaPredicted RBP15.59■□□□□ 0.09
CLN6-220ENST00000637450 NMNAT1Q9HAN9 279 aaPredicted RBP15.59■□□□□ 0.09
CLN6-220ENST00000637450 TMEM106BQ9NUM4 274 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 STARD10Q9Y365 291 aa15.59■□□□□ 0.09
CLN6-220ENST00000637450 TEX13CA0A0J9YWL9 993 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 NME4O00746 187 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 GSTA4O15217 222 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 DOK2O60496 412 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 FOXH1O75593 365 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 SERPINA1P01009 418 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 SBK2P0C263 348 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 CTLA4P16410 223 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 HTR5AP47898 357 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 RRM2BQ7LG56 351 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 BPIFB2Q8N4F0 458 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 ZNF283Q8N7M2 679 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 HAVCR1Q96D42 359 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 ZNF570Q96NI8 536 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 ANKRD19PQ9H560 264 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 ESM1Q9NQ30 184 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 EGFL7Q9UHF1 273 aa15.58■□□□□ 0.08
CLN6-220ENST00000637450 POLR3KQ9Y2Y1 108 aaPredicted RBP15.58■□□□□ 0.08
CLN6-220ENST00000637450 ARHGAP32A7KAX9 2087 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 COX4I1P13073 169 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 TNFRSF1AP19438 455 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 TNFSF4P23510 183 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 FPR2P25090 351 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 RBMXP38159 391 aaKnown RBP15.57■□□□□ 0.08
CLN6-220ENST00000637450 SLC7A2P52569 658 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 AQP6Q13520 282 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 TMEM155Q4W5P6 130 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 C8orf82Q6P1X6 216 aaPredicted RBP15.57■□□□□ 0.08
CLN6-220ENST00000637450 LRRC28Q86X40 367 aaPredicted RBP15.57■□□□□ 0.08
CLN6-220ENST00000637450 C3orf56Q8N813 242 aa15.57■□□□□ 0.08
CLN6-220ENST00000637450 ZDHHC22Q8N966 263 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms