RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ANKRD63C9JTQ0 380 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF888P0CJ79 500 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ACP1P24666 158 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 BRS3P32247 399 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ACVRL1P37023 503 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 SRP9P49458 86 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 TMEM267Q0VDI3 215 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 SHHQ15465 462 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 LAIR1Q6GTX8 287 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 LETMD1Q6P1Q0 360 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 DHRS13Q6UX07 377 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 APOOLQ6UXV4 268 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 RTL10Q7L3V2 364 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF551Q7Z340 670 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 C2CD4CQ8TF44 421 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 TEAD3Q99594 435 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 KCNMB3Q9NPA1 279 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 SLC7A10Q9NS82 523 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CTSFQ9UBX1 484 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 PHLPP1O60346 1717 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 H7C2G1 150 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ARPC1BO15143 372 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 SOD2P04179 222 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 GRPP07492 148 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 HOXC4P09017 264 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 PRRX1P54821 245 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 MFAP5Q13361 173 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 MS4A13Q5J8X5 152 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 LY6G5CQ5SRR4 150 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 LGI3Q8N145 548 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 BPIFB2Q8N4F0 458 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 GABRG3Q99928 467 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 UBQLN3Q9H347 655 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 NSUN3Q9H649 340 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 PELI2Q9HAT8 420 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 NLKQ9UBE8 527 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CES1P1Q9UKY3 287 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 TUBGCP6Q96RT7 1819 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 TSPAN12O95859 305 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ACTL6AO96019 429 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 FAM87AP0C7U9 286 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 OSMP13725 252 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF93P35789 620 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 OPRD1P41143 372 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 GAB1Q13480 694 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 SLC9A3R2Q15599 337 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 OR4A47Q6IF82 309 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 NRMQ8IXM6 262 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF561Q8N587 486 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 LKAAEAR1Q8TD35 194 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 LRFN3Q9BTN0 628 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 RSRP1Q9BUV0 290 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CALHM2Q9HA72 323 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CORINQ9Y5Q5 1042 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 PRRC2AP48634 2157 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 MEIS3P1A6NDR6 274 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 A8MT66 165 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CCL22O00626 93 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 PPP1R17O96001 155 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ACRP10323 421 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 NAGAP17050 411 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 NPY4RP50391 375 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 METAP1P53582 386 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 DOC2AQ14183 400 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 WDR73Q6P4I2 378 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 DRAM2Q6UX65 266 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ABI3BPQ7Z7G0 1075 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF383Q8NA42 475 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 OR10P1Q8NGE3 313 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 DUSP19Q8WTR2 217 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CA5BP1Q8WTZ4 195 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ASB13Q8WXK3 278 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 FAM3CQ92520 227 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 FCRL1Q96LA6 429 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 GPR78Q96P69 363 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 TAAR9Q96RI9 348 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 AMBRA1Q9C0C7 1298 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 UBE2ZQ9H832 354 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 PARD6AQ9NPB6 346 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CA10Q9NS85 328 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 C2CD4BA6NLJ0 364 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 DUS4LO95620 317 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CRYAAP02489 173 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CD1AP06126 327 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 OR4Q2P0C623 313 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF26P17031 533 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 M6PRP20645 277 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 GLRA1P23415 457 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 SLC19A1P41440 591 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 NMUP48645 174 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CCL11P51671 97 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 TAS2R40P59535 323 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 ZNF788Q6ZQV5 615 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 CTU1Q7Z7A3 348 aaKnown RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 OR5AR1Q8NGP9 310 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 OR4S2Q8NH73 311 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 TMED6Q8WW62 240 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 RTN4IP1Q8WWV3 396 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-212ENST00000636194 TXLNGYQ9BZA5 131 aa5.55□□□□□ -1.52
SCN1A-212ENST00000636194 WASHC3Q9Y3C0 194 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms