RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 APEX1P27695 318 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 THBS4P35443 961 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 RGS6P49758 472 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 UCP2P55851 309 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 ESRRGP62508 458 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 SLC35F1Q5T1Q4 408 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 RGS7BPQ6MZT1 257 aaPredicted RBP12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 OR8D4Q8NGM9 314 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 PLEKHA8Q96JA3 519 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 POM121L2Q96KW2 1035 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 GABARAPL1Q9H0R8 117 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 NTN4Q9HB63 628 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 SRA1Q9HD15 236 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 DYNLRB1Q9NP97 96 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 SLCO1C1Q9NYB5 712 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 ASH2LQ9UBL3 628 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 REV1Q9UBZ9 1251 aa12.09□□□□□ -0.47
SNRPA1-216ENST00000626000 C5orf49A4QMS7 147 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 M0R233 179 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 SYNGR3O43761 229 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 GAAP10253 952 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 FMO3P31513 532 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 LIPAP38571 399 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 CDKN1AP38936 164 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 HTR5AP47898 357 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 EFNA4P52798 201 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 TEKQ02763 1124 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 ZMAT1Q5H9K5 638 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 TMEM179BQ7Z7N9 219 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 SLC37A3Q8NCC5 494 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 CPEB3Q8NE35 698 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 AKR7LQ8NHP1 331 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 NEU4Q8WWR8 484 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 HTRA1Q92743 480 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 COQ7Q99807 217 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 RBM4Q9BWF3 364 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 WNT5BQ9H1J7 359 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 SLC25A19Q9HC21 320 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 EMC7Q9NPA0 242 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 KRT84Q9NSB2 600 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 TBCCD1Q9NVR7 557 aa12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-216ENST00000626000 ITPR3Q14573 2671 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 PRODHO43272 600 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 ABHD16AO95870 558 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 TP53P04637 393 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 LCKP06239 509 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 CD99P14209 185 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 CCNOP22674 350 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 POU1F1P28069 291 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 GCH1P30793 250 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 ERFP50548 548 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 NUDT6P53370 316 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 KLF3P57682 345 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 CRMP1Q14194 572 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 ZNF718Q3SXZ3 478 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 FAM209AQ5JX71 171 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 ZNF774Q6NX45 483 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 CLEC2AQ6UVW9 174 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 VASH1Q7L8A9 365 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 OR4Q3Q8NH05 313 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 OR1F12Q8NHA8 337 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 SYNPRQ8TBG9 265 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 SNX33Q8WV41 574 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 TSSK2Q96PF2 358 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 DDOQ99489 341 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 NMNAT2Q9BZQ4 307 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 FN3KQ9H479 309 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 USF3Q68DE3 2245 aa12.07□□□□□ -0.48
SNRPA1-216ENST00000626000 A0A1W2PPW3 197 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 PRR23D1E9PI22 279 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 NDUFS8O00217 210 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 DCTN6O00399 190 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 F12P00748 615 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 PRR23D2P0DMB1 279 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 ZNF250P15622 560 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 CDK5Q00535 292 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 GINS1Q14691 196 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 KPNB1Q14974 876 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 MST1LQ2TV78 715 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 TEX30Q5JUR7 227 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 ELFN2Q5R3F8 820 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 ZNF362Q5T0B9 420 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 UGT2A3Q6UWM9 527 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 CYB561A3Q8NBI2 242 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 OR5L1Q8NGL2 311 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 OR1J1Q8NGS3 322 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 STMN2Q93045 179 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 C4orf45Q96LM5 186 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 DOK1Q99704 481 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 RBM4BQ9BQ04 359 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 CYSLTR2Q9NS75 346 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 CYB5R1Q9UHQ9 305 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 ORC6Q9Y5N6 252 aa12.06□□□□□ -0.48
SNRPA1-216ENST00000626000 IGLV3-9A0A075B6K5 115 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 LOC100509620A0A075B734 347 aa12.05□□□□□ -0.48
SNRPA1-216ENST00000626000 SURF4O15260 269 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms