RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 MOSPD2Q8NHP6 518 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 SPDL1Q96EA4 605 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 PLEKHA8Q96JA3 519 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 MPP4Q96JB8 637 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 SLC30A2Q9BRI3 323 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 SMURF2Q9HAU4 748 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 CCDC167Q9P0B6 97 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 STX18Q9P2W9 335 aaKnown RBP12.28□□□□□ -0.44
PNKP-218ENST00000625299 IL19Q9UHD0 177 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 RNF114Q9Y508 228 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 TIMM10BQ9Y5J6 103 aa12.28□□□□□ -0.44
PNKP-218ENST00000625299 IGHV3-64DA0A0J9YX35 117 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 M0QX08 132 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 ICMTO60725 284 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 OR7A10O76100 309 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 NDUFA7O95182 113 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 TSPAN15O95858 294 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 VIMP08670 466 aaKnown RBP12.27□□□□□ -0.45
PNKP-218ENST00000625299 CST2P09228 141 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 NR2C1P13056 603 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 SELEP16581 610 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 GPX2P18283 190 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 GUCA1AP43080 201 aaPredicted RBP12.27□□□□□ -0.45
PNKP-218ENST00000625299 ERFP50548 548 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 PCBP3P57721 371 aaKnown RBP12.27□□□□□ -0.45
PNKP-218ENST00000625299 FGF12P61328 243 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 PCBD1P61457 104 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 TTMPQ5BVD1 217 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 SLC27A4Q6P1M0 643 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 SLC25A47Q6Q0C1 308 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 FUNDC1Q8IVP5 155 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 OR5AS1Q8N127 324 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 C11orf65Q8NCR3 313 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 FAM110DQ8TAY7 271 aaPredicted RBP12.27□□□□□ -0.45
PNKP-218ENST00000625299 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
PNKP-218ENST00000625299 CMBLQ96DG6 245 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 SGTBQ96EQ0 304 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 NEIL1Q96FI4 390 aaPredicted RBP12.27□□□□□ -0.45
PNKP-218ENST00000625299 NUDT16L1Q9BRJ7 211 aaKnown RBP12.27□□□□□ -0.45
PNKP-218ENST00000625299 ZNF426Q9BUY5 554 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 GCM1Q9NP62 436 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 MIOXQ9UGB7 285 aa12.27□□□□□ -0.45
PNKP-218ENST00000625299 NDRG4Q9ULP0 352 aaKnown RBP12.27□□□□□ -0.45
PNKP-218ENST00000625299 TRBV5-3A0A0A0MS03 114 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 GMNCA6NCL1 334 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 SLC22A31A6NKX4 558 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 ALX3O95076 343 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 MT-ND1P03886 318 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 MELTFP08582 738 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 PITPNBP48739 271 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 PDCD1Q15116 288 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 TAF9Q16594 264 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 FAM205BPQ63HN1 556 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 C1orf94Q6P1W5 598 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 BLOC1S3Q6QNY0 202 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 Q6YL49 198 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 NLRC3Q7RTR2 1065 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 PTOV1Q86YD1 416 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 OR10AD1Q8NGE0 317 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 OR8B3Q8NGG8 313 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 SLC26A7Q8TE54 656 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 TMEM255BQ8WV15 326 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 OR8B2Q96RD0 313 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 PRSS27Q9BQR3 290 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 CPPED1Q9BRF8 314 aaPredicted RBP12.26□□□□□ -0.45
PNKP-218ENST00000625299 PCGF1Q9BSM1 259 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 TMEM165Q9HC07 324 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 TCF7L1Q9HCS4 588 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 NOX4Q9NPH5 578 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 C20orf141Q9NUB4 165 aa12.26□□□□□ -0.45
PNKP-218ENST00000625299 KIR2DS1A0A191URI9 304 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 TMEM120BA0PK00 339 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 POLR3GO15318 223 aaPredicted RBP12.25□□□□□ -0.45
PNKP-218ENST00000625299 DOK2O60496 412 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 ERLIN1O75477 346 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 KITLGP21583 273 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 HTR5AP47898 357 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 HLXQ14774 488 aaPredicted RBP12.25□□□□□ -0.45
PNKP-218ENST00000625299 LAPTM4AQ15012 233 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 ZNF620Q6ZNG0 422 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 NKAIN4Q8IVV8 208 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 DACT3Q96B18 629 aaPredicted RBP12.25□□□□□ -0.45
PNKP-218ENST00000625299 RBP7Q96R05 134 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 TMEM246Q9BRR3 403 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 TXNIPQ9H3M7 391 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 PRDM13Q9H4Q3 707 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 TBCCD1Q9NVR7 557 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 ASH2LQ9UBL3 628 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 CLN8Q9UBY8 286 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 STARD10Q9Y365 291 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 USH1CQ9Y6N9 552 aa12.25□□□□□ -0.45
PNKP-218ENST00000625299 MSR1P21757 451 aa12.24□□□□□ -0.45
PNKP-218ENST00000625299 MTPNP58546 118 aa12.24□□□□□ -0.45
PNKP-218ENST00000625299 TAS2R41P59536 307 aa12.24□□□□□ -0.45
PNKP-218ENST00000625299 GUCY1A3Q02108 690 aa12.24□□□□□ -0.45
PNKP-218ENST00000625299 ENDOGQ14249 297 aaKnown RBP12.24□□□□□ -0.45
PNKP-218ENST00000625299 AGKQ53H12 422 aa12.24□□□□□ -0.45
PNKP-218ENST00000625299 ALG10Q5BKT4 473 aa12.24□□□□□ -0.45
PNKP-218ENST00000625299 TNFAIP8L3Q5GJ75 292 aa12.24□□□□□ -0.45
PNKP-218ENST00000625299 FAM201AQ5SY85 155 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms