RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SEC14L4Q9UDX3 406 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 TRAPPC4Q9Y296 219 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 LRRC42Q9Y546 428 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 KIF26BQ2KJY2 2108 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 OIP5O43482 229 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 IGFBP1P08833 259 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 AMY2BP19961 511 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 CD40LGP29965 261 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 KCNJ8Q15842 424 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 ZXDCQ2QGD7 858 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 MOGAT1Q96PD6 335 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 TIMP4Q99727 224 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 FBXO9Q9UK97 447 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-229ENST00000622668 OR52A1Q9UKL2 312 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 RNF6Q9Y252 685 aa8.12□□□□□ -1.11
HDAC9-229ENST00000622668 SIP14410 1827 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 SMAD7O15105 426 aaKnown RBP8.11□□□□□ -1.11
HDAC9-229ENST00000622668 SLC34A2O95436 690 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 GNRHRP30968 328 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 WNT4P56705 351 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 TRAM1Q15629 374 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 TBRG1Q3YBR2 411 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 PLXDC2Q6UX71 529 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 PIWIL3Q7Z3Z3 882 aaKnown RBP8.11□□□□□ -1.11
HDAC9-229ENST00000622668 KCTD20Q7Z5Y7 419 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 ADGRG3Q86Y34 549 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 HAVCR2Q8TDQ0 301 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 HDAC2Q92769 488 aaKnown RBP8.11□□□□□ -1.11
HDAC9-229ENST00000622668 EMG1Q92979 244 aaKnown RBP8.11□□□□□ -1.11
HDAC9-229ENST00000622668 TMEM106AQ96A25 262 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 APOBEC3DQ96AK3 386 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-229ENST00000622668 FGGYQ96C11 551 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 SIAEQ9HAT2 523 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 GPR173Q9NS66 373 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 CISD1Q9NZ45 108 aaKnown RBP8.11□□□□□ -1.11
HDAC9-229ENST00000622668 TREM2Q9NZC2 230 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 AMDHD2Q9Y303 409 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 LIPGQ9Y5X9 500 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 TCRBV3S1A0A5B6 114 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 SERTM1A2A2V5 107 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 GSTP1P09211 210 aaKnown RBP8.11□□□□□ -1.11
HDAC9-229ENST00000622668 SMIM10L1P0DMW3 83 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 SPI1P17947 270 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 DNASE1P24855 282 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 FXYD6P3P58550 94 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 RAB40BQ12829 278 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 TSPO2Q5TGU0 170 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 OR2G6Q5TZ20 316 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 HAGHLQ6PII5 290 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-229ENST00000622668 CCDC36Q8IYA8 594 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 TMIGD2Q96BF3 282 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 SMIM10Q96HG1 83 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 RHNO1Q9BSD3 238 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 DCSTAMPQ9H295 470 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 GDF2Q9UK05 429 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-229ENST00000622668 OR14I1A6ND48 311 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 ACOD1A6NK06 481 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 PTAFRP25105 342 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 BEX5Q5H9J7 111 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 EMC4Q5J8M3 183 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 ELFN2Q5R3F8 820 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 AGAP6Q5VW22 663 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF774Q6NX45 483 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 TMED4Q7Z7H5 227 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 CSNK2A3Q8NEV1 391 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 OR51E1Q8TCB6 317 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 SLCO1C1Q9NYB5 712 aa8.11□□□□□ -1.11
HDAC9-229ENST00000622668 ABCA2Q9BZC7 2435 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 ABCA1O95477 2261 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 B4DXG7 233 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 MCRIP1C9JLW8 97 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 PROB1E7EW31 1015 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 ERVH48-1M5A8F1 160 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 RECKO95980 971 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 UCHL1P09936 223 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 CALCBP10092 127 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 STOMP27105 288 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 MECP2P51608 486 aaKnown RBP8.1□□□□□ -1.11
HDAC9-229ENST00000622668 TNFAIP6P98066 277 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-229ENST00000622668 AQP6Q13520 282 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 P2RY6Q15077 328 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 PLPPR5Q32ZL2 321 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 OR52H1Q8NGJ2 320 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 SLC7A6Q92536 515 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 MCHR2Q969V1 340 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 HRASLS5Q96KN8 279 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 METTL9Q9H1A3 318 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 MS4A5Q9H3V2 200 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 EXOSC3Q9NQT5 275 aaKnown RBP8.1□□□□□ -1.11
HDAC9-229ENST00000622668 TNFRSF19Q9NS68 423 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 ZNF355PQ9NSJ1 428 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 C20orf141Q9NUB4 165 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 BABAM2Q9NXR7 383 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 PCNTO95613 3336 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 CHD5Q8TDI0 1954 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 LIPT2A6NK58 231 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 TSPAN2O60636 221 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 PRKCDQ05655 676 aa8.1□□□□□ -1.11
HDAC9-229ENST00000622668 HNRNPA0Q13151 305 aaKnown RBP8.1□□□□□ -1.11
HDAC9-229ENST00000622668 ACSM3Q53FZ2 586 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms