RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 DBHP09172 617 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 METTL15P1P0C7V9 234 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF660Q6AZW8 331 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 PLA2G15Q8NCC3 412 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 OR4K14Q8NGD5 310 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 OVCA2Q8WZ82 227 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 PDLIM5Q96HC4 596 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 UCK1Q9HA47 277 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 BRF2Q9HAW0 419 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SLC16A7O60669 478 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 OR5H8P0DN80 308 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 POLR2HP52434 150 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF385BQ569K4 471 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SLC35G3Q8N808 338 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 OR10AD1Q8NGE0 317 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 OIT3Q8WWZ8 545 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF2Q9BSG1 426 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SLC25A31Q9H0C2 315 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 OR51I2Q9H344 312 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 B4GALT6Q9UBX8 382 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 CLTCQ00610 1675 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 RBFOX3A6NFN3 312 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 MSTNO14793 375 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 RAB40ALP0C0E4 278 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 HIST1H3AP68431 136 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM174Q8WUU8 243 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 RAB40AQ8WXH6 277 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SGPP1Q9BX95 441 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 KCNG2Q9UJ96 466 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SEMA7AO75326 666 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 HPP00738 406 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 RPL12P30050 165 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF33AQ06730 810 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 GPR18Q14330 331 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 MRM1Q6IN84 353 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 BTNL3Q6UXE8 466 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 C19orf43Q9BQ61 176 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM204Q9BSN7 226 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 CSNK1G1Q9HCP0 422 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TAAR2Q9P1P5 351 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 OPRM1P35372 400 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 MFGE8Q08431 387 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 UBE2V2Q15819 145 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 GPR150Q8NGU9 434 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 PCED1AQ9H1Q7 454 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 LEFTY2O00292 366 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SOD3P08294 240 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 RAB7AP51149 207 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 UCP3P55916 312 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 LAIR2Q6ISS4 152 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 FAM208AQ9UK61 1670 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 NDUFB6O95139 128 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 HTR2CP28335 458 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 CCSMST1Q4G0I0 132 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 XKR7Q5GH72 579 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 MRPL2Q5T653 305 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM68Q96MH6 324 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 DMRT1Q9Y5R6 373 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 USP32Q8NFA0 1604 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM129A0AVI4 362 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SERPINE2P07093 398 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SLC35A1P78382 337 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ATPAF1Q5TC12 328 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 LYG2Q86SG7 212 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 RNF113BQ8IZP6 322 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 C2orf69Q8N8R5 385 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF740Q8NDX6 193 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 FAM71CQ8NEG0 241 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 HINT3Q9NQE9 182 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 C1orf123Q9NWV4 160 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 HAO2Q9NYQ3 351 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 NAGKQ9UJ70 344 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 IFT172Q9UG01 1749 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TPPP2P59282 170 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 AGERQ15109 404 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TSPO2Q5TGU0 170 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF343Q6P1L6 599 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 VN1R1Q9GZP7 353 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SIDT1Q9NXL6 827 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 C2orf72A6NCS6 295 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 COCHO43405 550 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 GLCEO94923 617 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 PGA4P0DJD7 388 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 PGA5P0DJD9 388 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SLC37A1P57057 533 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 LSM11P83369 360 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 PPP1R1AQ13522 171 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 C1orf185Q5T7R7 199 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ASB17Q8WXJ9 295 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 CHRDL1Q9BU40 450 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 A4GALTQ9NPC4 353 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 MYO18AQ92614 2054 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 NALCNQ8IZF0 1738 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 CLDN1O95832 211 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SLC35G6P0C7Q6 338 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 KITLGP21583 273 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 OTX1P32242 354 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 COMPP49747 757 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF626Q68DY1 528 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 IL34Q6ZMJ4 242 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms