RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SNAPC1Q16533 368 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF74Q16587 644 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TSTQ16762 297 aaKnown RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 SLC35F1Q5T1Q4 408 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ANKRD34AQ69YU3 496 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 OR7E24Q6IFN5 339 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 PODNL1Q6PEZ8 512 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 PAQR6Q6TCH4 344 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 PRSS57Q6UWY2 283 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 C20orf204Q6ZNR8 217 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 Q6ZT83 130 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 C22orf34Q6ZV56 151 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 GDPD3Q7L5L3 318 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 GID4Q8IVV7 300 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TUSC5Q8IXB3 177 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 PHC2Q8IXK0 858 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CCDC36Q8IYA8 594 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CDK20Q8IZL9 346 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 LRRC75A-AS1Q8N1F1 130 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 C17orf78Q8N4C9 275 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 C19orf18Q8NEA5 215 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 OR52N1Q8NH53 320 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 OR52J3Q8NH60 311 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 MFSD8Q8NHS3 518 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF417Q8TAU3 575 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TEX47Q8TBZ9 253 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM163Q8TC26 289 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 SLC7A13Q8TCU3 470 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 C15orf40Q8WUR7 153 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM239Q8WW34 195 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 UFD1Q92890 307 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 UBE2FQ969M7 185 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 PIGTQ969N2 578 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 OTULINQ96BN8 352 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 SLC25A36Q96CQ1 311 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF486Q96H40 463 aaPredicted RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 HS6ST2Q96MM7 605 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 OPALINQ96PE5 141 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF587Q96SQ5 575 aaPredicted RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 NAA11Q9BSU3 229 aaPredicted RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 OR51E2Q9H255 320 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CXXC4Q9H2H0 198 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CLEC4MQ9H2X3 399 aaPredicted RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 SLA2Q9H6Q3 261 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 RPRD1BQ9NQG5 326 aaKnown RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 IL20Q9NYY1 176 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 PTTG3PQ9NZH4 202 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 COPZ2Q9P299 210 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 EXOGQ9Y2C4 368 aaKnown RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 LSM2Q9Y333 95 aaKnown RBP4.63□□□□□ -1.67
SHMT1-211ENST00000618902 CMAHPQ9Y471 501 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 ABCA2Q9BZC7 2435 aa4.63□□□□□ -1.67
SHMT1-211ENST00000618902 NAV3Q8IVL0 2385 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 CYSRT1A8MQ03 144 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 FAM171A2A8MVW0 826 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 PLPP3O14495 311 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 CDC42EP2O14613 210 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 RGS5O15539 181 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 KLF4O43474 513 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 TRAF3IP2O43734 574 aaPredicted RBP4.62□□□□□ -1.67
SHMT1-211ENST00000618902 TLX2O43763 284 aaPredicted RBP4.62□□□□□ -1.67
SHMT1-211ENST00000618902 GPX5O75715 221 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 OR7A10O76100 309 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF432O94892 652 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 SERPINA3P01011 423 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 ASAH2BP0C7U1 165 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 FOSL1P15407 271 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 PAX1P15863 534 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 CRYGSP22914 178 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 DNASE1P24855 282 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 FPR3P25089 353 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 POU1F1P28069 291 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 RPS19P39019 145 aaKnown RBP4.62□□□□□ -1.67
SHMT1-211ENST00000618902 RBM34P42696 430 aaKnown RBP4.62□□□□□ -1.67
SHMT1-211ENST00000618902 OR3A2P47893 321 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 RAG2P55895 527 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 TPTEP56180 551 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 FXYD6P3P58550 94 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 BTG1P62324 171 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 PITPNAQ00169 270 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 RASGEF1BQ0VAM2 473 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 POU4F2Q12837 409 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 GINS1Q14691 196 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 LAPTM4AQ15012 233 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 POU4F3Q15319 338 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 STK11Q15831 433 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 C3orf36Q3SXR2 165 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 BEX5Q5H9J7 111 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 FAM69AQ5T7M9 428 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 LCN1P1Q5VSP4 162 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 NXNL2Q5VZ03 156 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM236Q5W0B7 351 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 ADAM5Q6NVV9 412 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 PGBD2Q6P3X8 592 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 BAIAP2L2Q6UXY1 529 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 TFAP2EQ6VUC0 442 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 LINGO2Q7L985 606 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 ZER1Q7Z7L7 766 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 LUZP2Q86TE4 346 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 NRMQ8IXM6 262 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms