RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 MYBPHQ13203 477 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 OR5H2Q8NGV7 314 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 MUCL1Q96DR8 90 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 ZNF845Q96IR2 970 aaPredicted RBP12.55□□□□□ -0.4
CIITA-213ENST00000618327 TCEAL7Q9BRU2 100 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 CDC42EP2O14613 210 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 TP53P04637 393 aaPredicted RBP12.55□□□□□ -0.4
CIITA-213ENST00000618327 FCGR2AP12318 317 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 FOXB2Q5VYV0 432 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 NPSR1Q6W5P4 371 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 FAM83FQ8NEG4 500 aaPredicted RBP12.55□□□□□ -0.4
CIITA-213ENST00000618327 FGGYQ96C11 551 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 PAPOLGQ9BWT3 736 aaKnown RBP12.55□□□□□ -0.4
CIITA-213ENST00000618327 PLA2G3Q9NZ20 509 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 B9D1Q9UPM9 204 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 TRIM64A6NGJ6 449 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 ARPC3O15145 178 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 SGCEO43556 437 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 CSF1P09603 554 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 BTN1A1Q13410 526 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 DYRK1AQ13627 763 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 NKPD1Q17RQ9 610 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 CSNK2A3Q8NEV1 391 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 SLAMF6Q96DU3 332 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 ARL5BQ96KC2 179 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 RASL10BQ96S79 203 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 PRMT8Q9NR22 394 aaPredicted RBP12.55□□□□□ -0.4
CIITA-213ENST00000618327 DTX4Q9Y2E6 619 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 TEX51A0A1B0GUA7 166 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 MC2RQ01718 297 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 IL10RAQ13651 578 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 COX15Q7KZN9 410 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 NRARPQ7Z6K4 114 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 ZNF679Q8IYX0 411 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 FAM173AQ9BQD7 235 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 FAM186AA6NE01 2351 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 SERPINA2P20848 420 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 TPBGQ13641 420 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 ARTNQ5T4W7 220 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 DGAT2L6Q6ZPD8 337 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 POC1BQ8TC44 478 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 DCUN1D4Q92564 292 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 TSPAN10Q9H1Z9 355 aaPredicted RBP12.54□□□□□ -0.4
CIITA-213ENST00000618327 C12orf10Q9HB07 376 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 FLRT3Q9NZU0 649 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 MEIS3P1A6NDR6 274 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 TXNL1O43396 289 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 SMIM10L1P0DMW3 83 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 CSF2RBP32927 897 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 MTCP1P56278 107 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 EGR3Q06889 387 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 ZNF585AQ6P3V2 769 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 ZNF611Q8N823 705 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 OR5T1Q8NG75 326 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 OR56B2PQ8NGI1 322 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 OR2V1Q8NHB1 315 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 SLC25A46Q96AG3 418 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 SMIM10Q96HG1 83 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 KCNG2Q9UJ96 466 aa12.54□□□□□ -0.4
CIITA-213ENST00000618327 MN1Q10571 1320 aaPredicted RBP12.54□□□□□ -0.4
CIITA-213ENST00000618327 PLXNA3P51805 1871 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 A0A1W2PQD3 144 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 ZNF736B4DX44 427 aaPredicted RBP12.53□□□□□ -0.4
CIITA-213ENST00000618327 SSTR2P30874 369 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 SOX18P35713 384 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 HYAL4Q2M3T9 481 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 IL17RDQ8NFM7 739 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 GLYATL2Q8WU03 294 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 YIPF6Q96EC8 236 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 SULT4A1Q9BR01 284 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 SULT1C4O75897 302 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 SP9P0CG40 484 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 IRF2P14316 349 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 CD53P19397 219 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 GABRR1P24046 479 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 CDK2P24941 298 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 GIFP27352 417 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 WIPI1Q5MNZ9 446 aaPredicted RBP12.53□□□□□ -0.4
CIITA-213ENST00000618327 OTPQ5XKR4 325 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 THSD4Q6ZMP0 1018 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 LSMEM1Q8N8F7 131 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 M1APQ8TC57 530 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 GPR87Q9BY21 358 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 WDR54Q9H977 334 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 ISG20L2Q9H9L3 353 aaKnown RBP12.53□□□□□ -0.4
CIITA-213ENST00000618327 ING1Q9UK53 422 aaPredicted RBP12.53□□□□□ -0.4
CIITA-213ENST00000618327 DBHP09172 617 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 FOXC1Q12948 553 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 ZNF674Q2M3X9 581 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 MKXQ8IYA7 352 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 SARAFQ96BY9 339 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 RHBDD3Q9Y3P4 386 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 ZNF175Q9Y473 711 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 EP300Q09472 2414 aaPredicted RBP12.53□□□□□ -0.4
CIITA-213ENST00000618327 POU3F3P20264 500 aaPredicted RBP12.53□□□□□ -0.4
CIITA-213ENST00000618327 ACHEP22303 614 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 CAV2P51636 162 aa12.53□□□□□ -0.4
CIITA-213ENST00000618327 CDK5R1Q15078 307 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms