RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 GPR85P60893 370 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 SNRPD2P62316 118 aaKnown RBP11.07□□□□□ -0.64
CIITA-212ENST00000618207 ZFP36L1Q07352 338 aaKnown RBP11.07□□□□□ -0.64
CIITA-212ENST00000618207 GFOD2Q3B7J2 385 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 ASPHD2Q6ICH7 369 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 HAVCR2Q8TDQ0 301 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 PHYHIPQ92561 330 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 RBP7Q96R05 134 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 ZMAT3Q9HA38 289 aaKnown RBP11.07□□□□□ -0.64
CIITA-212ENST00000618207 ALKBH4Q9NXW9 302 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 PISDQ9UG56 409 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 H3BUI4 141 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 TP53I11O14683 189 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 ALX3O95076 343 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 TCN2P20062 427 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 DCTDP32321 178 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 POU3F4P49335 361 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 SUMO3P55854 103 aaPredicted RBP11.07□□□□□ -0.64
CIITA-212ENST00000618207 MFSD13AQ14CX5 517 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 FAM205BPQ63HN1 556 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 FAM122CQ6P4D5 195 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 C5orf46Q6UWT4 87 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 LUZP2Q86TE4 346 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 JAGN1Q8N5M9 183 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 OR13C3Q8NGS6 347 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 SMIM4Q8WVI0 70 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 ASB17Q8WXJ9 295 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 NKD1Q969G9 470 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 MNTQ99583 582 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 ZNF222Q9UK12 451 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 FOXJ3Q9UPW0 622 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 B3GALT5Q9Y2C3 310 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 MED13Q9UHV7 2174 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 A6NIZ1 184 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 YKT6O15498 198 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 ZNF208O43345 1280 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 STK17BO94768 372 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 ZNF43P17038 809 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 PTGS2P35354 604 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 FOLR3P41439 243 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 RAP1BP61224 184 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 RRAS2P62070 204 aaPredicted RBP11.06□□□□□ -0.64
CIITA-212ENST00000618207 RAP1AP62834 184 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 GUCA2AQ02747 115 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 FCN2Q15485 313 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 DNM1P34Q6PK57 102 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 NOXA1Q86UR1 476 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 ZNF227Q86WZ6 799 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 COMMD2Q86X83 199 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 ELMOD2Q8IZ81 293 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 ASB5Q8WWX0 329 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 CREB3L1Q96BA8 519 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 DOCK7Q96N67 2140 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 LOC107986453A0A1B0GWG9 222 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 IGHMP01871 453 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 GNALP38405 381 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 MPLP40238 635 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 DNASE1L1P49184 302 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 PTH2RP49190 550 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 GNG2P59768 71 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 SLC23A3Q6PIS1 610 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 RPS19BP1Q86WX3 136 aaKnown RBP11.06□□□□□ -0.64
CIITA-212ENST00000618207 OR2Y1Q8NGV0 311 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 ST7LQ8TDW4 575 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 MCHR2Q969V1 340 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 MS4A3Q96HJ5 214 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 IMMP1LQ96LU5 166 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 TMEM246Q9BRR3 403 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 OR10A4Q9H209 315 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 HPF1Q9NWY4 346 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 OR52A1Q9UKL2 312 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 PCNX2A6NKB5 2137 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 ZNF407Q9C0G0 2248 aa11.06□□□□□ -0.64
CIITA-212ENST00000618207 TRBV5-7A0A0A0MS05 114 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 DHFRP00374 187 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 HLA-DMAP28067 261 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 MSX1P28360 303 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 BLVRAP53004 296 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 TAS2R20P59543 309 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 GALK2Q01415 458 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 MC2RQ01718 297 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 TEX30Q5JUR7 227 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 GLYATL3Q5SZD4 288 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 PLCZ1Q86YW0 608 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 FCAMRQ8WWV6 532 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 AKAP1Q92667 903 aaKnown RBP eCLIP11.05□□□□□ -0.64
CIITA-212ENST00000618207 RNF170Q96K19 258 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 UCN2Q96RP3 112 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 MED28Q9H204 178 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 WDR54Q9H977 334 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 MOV10Q9HCE1 1003 aaKnown RBP11.05□□□□□ -0.64
CIITA-212ENST00000618207 STEAP1Q9UHE8 339 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 NXT1Q9UKK6 140 aaKnown RBP11.05□□□□□ -0.64
CIITA-212ENST00000618207 TRAV18A0A075B6X5 111 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 LOC400499M0QZD8 3231 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 KRT33AO76009 404 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 CD2P06729 351 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 SSR4P51571 173 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 CLDN17P56750 224 aa11.05□□□□□ -0.64
CIITA-212ENST00000618207 C2orf76Q3KRA6 126 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms