RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 TMEM41AQ96HV5 264 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 KIRREL1Q96J84 757 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 PRRT1Q99946 306 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 RAB33BQ9H082 229 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 TAF9BQ9HBM6 251 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 FAM86C1Q9NVL1 165 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 EPHA6Q9UF33 1036 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 ENTPD2Q9Y5L3 495 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 TRPM7Q96QT4 1865 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 C7orf77A4D0Y5 90 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 OR4C45A6NMZ5 311 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 PRRT4C9JH25 899 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 RHOP08100 348 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 CT62P0C5K7 136 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 GLI4P10075 376 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 GLP1RP43220 463 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 LPAR6P43657 344 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 FAM53BQ14153 422 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 ERV3-1Q14264 604 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 NFATC4Q14934 902 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 DHCR24Q15392 516 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 ACTBL2Q562R1 376 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 FCRL6Q6DN72 434 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 DPY19L2P2Q6ZN68 376 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 SLC16A9Q7RTY1 509 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 SKA3Q8IX90 412 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 ZNF679Q8IYX0 411 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 OR13C3Q8NGS6 347 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 OR13C8Q8NGS7 320 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 OR51F2Q8NH61 342 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 MFSD8Q8NHS3 518 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 GPX8Q8TED1 209 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 RERGQ96A58 199 aaPredicted RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 RRNAD1Q96FB5 475 aaKnown RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 SPACA7Q96KW9 195 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 UTP23Q9BRU9 249 aaKnown RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 TOLLIPQ9H0E2 274 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 RCC2Q9P258 522 aaKnown RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 LRIT1Q9P2V4 623 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 DEC1Q9P2X7 70 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 LSM5Q9Y4Y9 91 aaKnown RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 SCN10AQ9Y5Y9 1956 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 PLXNA3P51805 1871 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 A0A1W2PPC1 479 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 MANSC4A6NHS7 340 aaPredicted RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 TMEM212A6NML5 194 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 P2RX6O15547 441 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 ZNF354AO60765 605 aaPredicted RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 UPK3AO75631 287 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 CRHP06850 196 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 GNB3P16520 340 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 LAP3P28838 519 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 VIPR2P41587 438 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 OR3A2P47893 321 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 ZNF674Q2M3X9 581 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 DEFB110Q30KQ9 67 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 C14orf28Q4W4Y0 310 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 LPCAT3Q6P1A2 487 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 PSRC1Q6PGN9 363 aaPredicted RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 DHRS11Q6UWP2 260 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 BIVMQ86UB2 503 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 C12orf40Q86WS4 652 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 STX12Q86Y82 276 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 SAMD14Q8IZD0 417 aaPredicted RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 ZNF383Q8NA42 475 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 ZSCAN4Q8NAM6 433 aaPredicted RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 OR10H5Q8NGA6 315 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 POM121Q96HA1 1249 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 HHIPL1Q96JK4 782 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 ELL3Q9HB65 397 aaPredicted RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 PHPT1Q9NRX4 125 aaPredicted RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 UFSP2Q9NUQ7 469 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 OR5AC2Q9NZP5 309 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 LPAR3Q9UBY5 353 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 B9D1Q9UPM9 204 aa6.03□□□□□ -1.44
LMO3-235ENST00000616247 MRPS2Q9Y399 296 aaKnown RBP6.03□□□□□ -1.44
LMO3-235ENST00000616247 TCF20Q9UGU0 1960 aaKnown RBP6.02□□□□□ -1.45
LMO3-235ENST00000616247 COL4A4P53420 1690 aaPredicted RBP6.02□□□□□ -1.45
LMO3-235ENST00000616247 URADA6NGE7 173 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 C9JQL5 133 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 SDCBPO00560 298 aaPredicted RBP6.02□□□□□ -1.45
LMO3-235ENST00000616247 SLC17A2O00624 439 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 SLC16A7O60669 478 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 OR8U9P0C7N5 309 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 TSFMP43897 325 aaKnown RBP6.02□□□□□ -1.45
LMO3-235ENST00000616247 CLDN6P56747 220 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 ZNF345Q14585 488 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 PLPP4Q5VZY2 271 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 CYB5R2Q6BCY4 276 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 KDM8Q8N371 416 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 METTL27Q8N6F8 245 aaPredicted RBP6.02□□□□□ -1.45
LMO3-235ENST00000616247 TMEM229BQ8NBD8 167 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 TMEM104Q8NE00 496 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 OR10D4PQ8NGN7 298 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 OR8U1Q8NH10 309 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 OR4C3Q8NH37 302 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 EDARADDQ8WWZ3 215 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 METTL21AQ8WXB1 218 aa6.02□□□□□ -1.45
LMO3-235ENST00000616247 SLAMF9Q96A28 289 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms