RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 LURAP1LQ8IV03 231 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 C19orf43Q9BQ61 176 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 SERTAD3Q9UJW9 196 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 C4orf47A7E2U8 309 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 SOD1P00441 154 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 FABP2P12104 132 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 GLYATL3Q5SZD4 288 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 OR2T10Q8NGZ9 312 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 SLC38A5Q8WUX1 472 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 APIPQ96GX9 242 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 LINC00052Q96N35 136 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 SLC17A9Q9BYT1 436 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 HSFX1Q9UBD0 423 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 PCDHGA9Q9Y5G4 932 aaKnown RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 NSG1A0A0A6YYJ2 146 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 RHBDD3Q9Y3P4 386 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 LRP3O75074 770 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 CRHP06850 196 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 TMEM64Q6YI46 380 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 WDR89Q96FK6 387 aaPredicted RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 CDH20Q9HBT6 801 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 CTDSPLO15194 276 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 SRP14P37108 136 aaKnown RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 NPY4RP50391 375 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 NKAIN1Q4KMZ8 207 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 PHOSPHO2Q8TCD6 241 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 FAM216AQ8WUB2 273 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 C3orf30Q96M34 536 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 CHST6Q9GZX3 395 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 PARP11Q9NR21 331 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 MRPS28Q9Y2Q9 187 aaKnown RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 ANTXRLA6NF34 631 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 UNCXA6NJT0 531 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 RTCAO00442 366 aaKnown RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 ATXN1LP0C7T5 689 aaKnown RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 CD96P40200 585 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 FOXK2Q01167 660 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 USP50Q70EL3 339 aaPredicted RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 RPUSD4Q96CM3 377 aaKnown RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 MEGF10Q96KG7 1140 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 FOXN4Q96NZ1 517 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 FAM206AQ9NX38 181 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 USP54Q70EL1 1684 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 TGIF2-C20orf24A0A0A6YYL0 155 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 FIGNL2A6NMB9 653 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 SEMA7AO75326 666 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 CSN1S1P47710 185 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 DLX2Q07687 328 aaPredicted RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 TMEM104Q8NE00 496 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 BCORQ6W2J9 1755 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 A0A1B0GTW7 788 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 OR52A4PA6NMU1 304 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 ADCYAP1R1P41586 468 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 ATP6V1FQ16864 119 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 TUSC1Q2TAM9 212 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 TMEM65Q6PI78 240 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 PLXDC2Q6UX71 529 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 OR52R1Q8NGF1 315 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 OR14C36Q8NHC7 312 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 SIRT3Q9NTG7 399 aaPredicted RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 KLF15Q9UIH9 416 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 TCRBV5S2A0A599 114 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 SHC1P29353 583 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 SULT1A1P50225 295 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 C2orf73Q8N5S3 287 aaPredicted RBP8.06□□□□□ -1.12
TTC28-208ENST00000612946 OR5B3Q8NH48 314 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 SLCO4A1Q96BD0 722 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 REEP6Q96HR9 211 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 ADGRG7Q96K78 797 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 PMCHL2Q9BQD1 86 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 TMEM204Q9BSN7 226 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 MAP1LC3B2A6NCE7 125 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 TCF21O43680 179 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 EIF4EP06730 217 aaKnown RBP8.06□□□□□ -1.12
TTC28-208ENST00000612946 KLHDC8AQ8IYD2 350 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 HERPUD2Q9BSE4 406 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 MAP1LC3BQ9GZQ8 125 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 KCNK12Q9HB15 430 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 FKBP1BP68106 108 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 HYAL4Q2M3T9 481 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 AWAT1Q58HT5 328 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 EOGTQ5NDL2 527 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 OR2A2Q6IF42 318 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 KCNK15Q9H427 330 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 ZDHHC8Q9ULC8 765 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 PHIPQ8WWQ0 1821 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 SOWAHBA6NEL2 793 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 GLOD5A6NK44 160 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 GFRA2O00451 464 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 SULT1A3P0DMM9 295 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 SULT1A4P0DMN0 295 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 PTPRCAPQ14761 206 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 PMCHL1Q16048 86 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 PRR22Q8IZ63 422 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 MAML2Q8IZL2 1156 aaPredicted RBP8.06□□□□□ -1.12
TTC28-208ENST00000612946 DDA1Q9BW61 102 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 PLEK2Q9NYT0 353 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 SNED1Q8TER0 1413 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 FZD6O60353 706 aa8.06□□□□□ -1.12
TTC28-208ENST00000612946 GP1BAP07359 652 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms