RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 KLHL12Q53G59 568 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF474Q6S9Z5 364 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 B3GLCTQ6Y288 498 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 DPY19L2P2Q6ZN68 376 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 BEND4Q6ZU67 534 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 H1FNTQ75WM6 255 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 NUFIP2Q7Z417 695 aaKnown RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 KLBQ86Z14 1044 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 ZFP41Q8N8Y5 198 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 SCAIQ8N9R8 606 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF610Q8N9Z0 462 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 SYT14Q8NB59 555 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 ADPRHL1Q8NDY3 354 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 RNF166Q96A37 237 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 CEP19Q96LK0 163 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 DCLRE1CQ96SD1 692 aaKnown RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 GPX7Q96SL4 187 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 DDOQ99489 341 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 ALG8Q9BVK2 526 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 OPN3Q9H1Y3 402 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 MIXL1Q9H2W2 232 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 C12orf49Q9H741 205 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 POLE4Q9NR33 117 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 PARPBPQ9NWS1 579 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 NOSIPQ9Y314 301 aaKnown RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 ADGRG4Q8IZF6 3080 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 PRR14LQ5THK1 2151 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 ARPC3O15145 178 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 RNF13O43567 381 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 IDH3BO43837 385 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 MRPL33O75394 65 aaKnown RBP7.79□□□□□ -1.16
SMAD4-217ENST00000611848 CNOT4O95628 575 aaKnown RBP7.79□□□□□ -1.16
SMAD4-217ENST00000611848 BGLAPP02818 100 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 MT-ND5P03915 603 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 COX6B1P14854 86 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 OR3A2P47893 321 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 TGM4P49221 684 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 ACTC1P68032 377 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 ACTA1P68133 377 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF85Q03923 595 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 MXD1Q05195 221 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 LTBQ06643 244 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 TFAP2EQ6VUC0 442 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 MEX3BQ6ZN04 569 aaKnown RBP7.79□□□□□ -1.16
SMAD4-217ENST00000611848 TMEM91Q6ZNR0 172 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 GPAT4Q86UL3 456 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 LAX1Q8IWV1 398 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 DMRTC2Q8IXT2 367 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF100Q8IYN0 542 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 C10orf53Q8N6V4 93 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 LRRC17Q8N6Y2 441 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 POC5Q8NA72 575 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 OR9K2Q8NGE7 335 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF417Q8TAU3 575 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 AP3S1Q92572 193 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 TMEM45BQ96B21 275 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF775Q96BV0 537 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-217ENST00000611848 ERMAPQ96PL5 475 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF587Q96SQ5 575 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-217ENST00000611848 OR51V1Q9H2C8 321 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 TPK1Q9H3S4 243 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 FKRPQ9H9S5 495 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 NRIP3Q9NQ35 241 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 MRPL39Q9NYK5 338 aaKnown RBP7.79□□□□□ -1.16
SMAD4-217ENST00000611848 FLVCR1Q9Y5Y0 555 aa7.79□□□□□ -1.16
SMAD4-217ENST00000611848 SIRT4Q9Y6E7 314 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-217ENST00000611848 LOC102725191A0A1B0GVB3 256 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 MCIDASD6RGH6 385 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 RGS5O15539 181 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 PLPP2O43688 288 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 RGS9O75916 674 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-217ENST00000611848 CLUP10909 449 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 HIST1H1CP16403 213 aaKnown RBP7.78□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF43P17038 809 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 TAS2R43P59537 309 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 PRPS1P60891 318 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 RPS7P62081 194 aaKnown RBP7.78□□□□□ -1.16
SMAD4-217ENST00000611848 TRAM1Q15629 374 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF79Q15937 498 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF74Q16587 644 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 GDPD3Q7L5L3 318 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 CADM3Q8N126 398 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 CYB561A3Q8NBI2 242 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 OR10H4Q8NGA5 316 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 OR52E2Q8NGJ4 325 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 OR5J2Q8NH18 312 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 SETD6Q8TBK2 473 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 OXGR1Q96P68 337 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 MOGAT1Q96PD6 335 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 SOSTQ9BQB4 213 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 TMED9Q9BVK6 235 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 HDHD5Q9BXW7 423 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 NMNAT2Q9BZQ4 307 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 SRRQ9GZT4 340 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 RERGLQ9H628 205 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 ABCB9Q9NP78 766 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 TRIM36Q9NQ86 728 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 NANSQ9NR45 359 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF229Q9UJW7 825 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 NOX1Q9Y5S8 564 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms