RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 TNFAIP8L1Q8WVP5 186 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 ARL5BQ96KC2 179 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 GSX2Q9BZM3 304 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 OR52A1Q9UKL2 312 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 VDAC3Q9Y277 283 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 CABIN1Q9Y6J0 2220 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 GOSR2O14653 212 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 FSTP19883 344 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 UBE2MP61081 183 aaKnown RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 SQSTM1Q13501 440 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 C4orf46Q504U0 113 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 GABRG1Q8N1C3 465 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 MUC20Q8N307 709 aaPredicted RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 SLC38A9Q8NBW4 561 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 OR51A2Q8NGJ7 313 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 ASB10Q8WXI3 467 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 ST8SIA1Q92185 356 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 MARVELD3Q96A59 401 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 CMKLR1Q99788 373 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 TMPRSS13Q9BYE2 586 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 MED11Q9P086 117 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 MYEF2Q9P2K5 600 aaKnown RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 MRPS18BQ9Y676 258 aaKnown RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 TMEM269A0A1B0GVZ9 245 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 LOC107986453A0A1B0GWG9 222 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 MEGF11A6BM72 1044 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 SHOXO15266 292 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 TAS2R19P59542 299 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 POU3F1Q03052 451 aaPredicted RBP15.42■□□□□ 0.06
NEK3-206ENST00000611833 TLE3Q04726 772 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 RIPPLY1Q0D2K3 151 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 MFSD13AQ14CX5 517 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 SMAD2Q15796 467 aaKnown RBP15.42■□□□□ 0.06
NEK3-206ENST00000611833 HYAL4Q2M3T9 481 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 C3P1Q6ZMU1 363 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 PNPLA2Q96AD5 504 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 C5orf34Q96MH7 638 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 CENPMQ9NSP4 180 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 A0A1W2PPL8 197 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 MCRIP1C9JLW8 97 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 SRSF10O75494 262 aaKnown RBP15.42■□□□□ 0.06
NEK3-206ENST00000611833 LPLP06858 475 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 FREM3P0C091 2139 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 ACHEP22303 614 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 APOBEC1P41238 236 aaKnown RBP15.42■□□□□ 0.06
NEK3-206ENST00000611833 ARRB1P49407 418 aaPredicted RBP15.42■□□□□ 0.06
NEK3-206ENST00000611833 ZP4Q12836 540 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 C2orf68Q2NKX9 166 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 RHBDD2Q6NTF9 364 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 C11orf88Q6PI97 169 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 ZNF704Q6ZNC4 412 aaPredicted RBP15.42■□□□□ 0.06
NEK3-206ENST00000611833 CHMP1BQ7LBR1 199 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 ADGRE4PQ86SQ3 457 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 OR2AK2Q8NG84 335 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 OR6S1Q8NH40 331 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 MFSD8Q8NHS3 518 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 SEH1LQ96EE3 360 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 TGIF2Q9GZN2 237 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 DUSP15Q9H1R2 295 aaPredicted RBP15.42■□□□□ 0.06
NEK3-206ENST00000611833 APMAPQ9HDC9 416 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 MED29Q9NX70 200 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 UPB1Q9UBR1 384 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 OPN4Q9UHM6 478 aa15.42■□□□□ 0.06
NEK3-206ENST00000611833 ATXN7L1Q9ULK2 861 aaPredicted RBP15.42■□□□□ 0.06
NEK3-206ENST00000611833 F5H5P2 479 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 SULT1C2O00338 296 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 EIF1AYO14602 144 aaKnown RBP15.41■□□□□ 0.06
NEK3-206ENST00000611833 ARPC5O15511 151 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 RAB3DO95716 219 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 HEXBP07686 556 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 ZNF35P13682 527 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 PTGS2P35354 604 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 H2BFSP57053 126 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 STARD6P59095 220 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 SEC61A1P61619 476 aaKnown RBP15.41■□□□□ 0.06
NEK3-206ENST00000611833 HSF1Q00613 529 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 ARSKQ6UWY0 536 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 WDFY1Q8IWB7 410 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 DDIT4LQ96D03 193 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 G6PC2Q9NQR9 355 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 SRPK3Q9UPE1 567 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 EXPH5Q8NEV8 1989 aa15.41■□□□□ 0.06
NEK3-206ENST00000611833 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 ZSCAN5BA6NJL1 495 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 ISG15P05161 165 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 H2BFMP0C1H6 154 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 SHBQ15464 509 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 SIGIRRQ6IA17 410 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 CORO6Q6QEF8 472 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 TMEM205Q6UW68 189 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 ZNF574Q6ZN55 896 aaPredicted RBP15.4■□□□□ 0.06
NEK3-206ENST00000611833 ANKRD37Q7Z713 158 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 SPEM1Q8N4L4 309 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 NFAM1Q8NET5 270 aaPredicted RBP15.4■□□□□ 0.06
NEK3-206ENST00000611833 LRRC20Q8TCA0 184 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 ST7LQ8TDW4 575 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 KCNK17Q96T54 332 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 POTEKPQ9BYX7 375 aa15.4■□□□□ 0.06
NEK3-206ENST00000611833 CHST6Q9GZX3 395 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms