RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 MEP1BQ16820 701 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 NKPD1Q17RQ9 610 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 ZNF770Q6IQ21 691 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-208ENST00000604743 PGM2L1Q6PCE3 622 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 SYT9Q86SS6 491 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 ZNF101Q8IZC7 436 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 OR10G2Q8NGC3 310 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 ABHD4Q8TB40 342 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 NEU4Q8WWR8 484 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-208ENST00000604743 PIMREGQ9BSJ6 248 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 CADM1Q9BY67 442 aaKnown RBP12.37□□□□□ -0.43
TUBE1-208ENST00000604743 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 ASH2LQ9UBL3 628 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 NSD1Q96L73 2696 aaPredicted RBP12.36□□□□□ -0.43
TUBE1-208ENST00000604743 HIVEP2P31629 2446 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 OR6C68A6NDL8 312 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 LYNX1G3V0Z9 82 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 GSC2O15499 205 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 SGCEO43556 437 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 SOX14O95416 240 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 HLA-DQA2P01906 255 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 TP53P04637 393 aaPredicted RBP12.36□□□□□ -0.43
TUBE1-208ENST00000604743 LYNX1P0DP58 116 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 HTR5AP47898 357 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 BNIP1Q12981 228 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 AQP6Q13520 282 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 GGTLC2Q14390 218 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 RPL13AP3Q6NVV1 102 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 RASSF6Q6ZTQ3 369 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 OR6V1Q8N148 313 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 CYB561A3Q8NBI2 242 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 OR8D4Q8NGM9 314 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 SLC7A6Q92536 515 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 C4orf45Q96LM5 186 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 TSSK6Q9BXA6 273 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 MS4A5Q9H3V2 200 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 NDRG4Q9ULP0 352 aaKnown RBP12.36□□□□□ -0.43
TUBE1-208ENST00000604743 POMPQ9Y244 141 aa12.36□□□□□ -0.43
TUBE1-208ENST00000604743 IGLV1-36A0A0B4J1U3 117 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 LOC390937A0A1W2PQ73 354 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 INAFM1C9JVW0 142 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 IDH3BO43837 385 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 NGFP01138 241 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 ZNF250P15622 560 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 GCH1P30793 250 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 LSM6P62312 80 aaKnown RBP12.35□□□□□ -0.43
TUBE1-208ENST00000604743 KRTAP1-1Q07627 177 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 ZNF718Q3SXZ3 478 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 UNQ6126/PRO20091Q6UXV3 157 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 RFPL4BQ6ZWI9 263 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 VASH1Q7L8A9 365 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-208ENST00000604743 TMEM179BQ7Z7N9 219 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 SLC25A40Q8TBP6 338 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 UBASH3BQ8TF42 649 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 GIPC3Q8TF64 312 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 SNX33Q8WV41 574 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 SNX18Q96RF0 628 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 NIPSNAP1Q9BPW8 284 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 WACQ9BTA9 647 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 OR2J1Q9GZK6 312 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 MYOZ1Q9NP98 299 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-208ENST00000604743 ARMC1Q9NVT9 282 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 IL20Q9NYY1 176 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 GPR160Q9UJ42 338 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 GRIP1Q9Y3R0 1128 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 FN1P02751 2386 aaKnown RBP12.35□□□□□ -0.43
TUBE1-208ENST00000604743 NAV3Q8IVL0 2385 aa12.35□□□□□ -0.43
TUBE1-208ENST00000604743 A0A096LNT2 108 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 BHLHE40O14503 412 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 RER1O15258 196 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 E2F6O75461 281 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 ABHD16AO95870 558 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 GAAP10253 952 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 GSTM3P21266 225 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 USF1P22415 310 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-208ENST00000604743 PYCR1P32322 319 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 MPV17P39210 176 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 ARHGDIAP52565 204 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 PPP1CBP62140 327 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 CBX1P83916 185 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 PPP2R2BQ00005 443 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 CCDC92Q53HC0 331 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-208ENST00000604743 TMEM154Q6P9G4 183 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 CORO6Q6QEF8 472 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 ARL9Q6T311 187 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 LINC00346Q8IVM7 164 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 NPEPL1Q8NDH3 523 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 IPCEF1Q8WWN9 437 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-208ENST00000604743 GTF3AQ92664 365 aaKnown RBP12.34□□□□□ -0.43
TUBE1-208ENST00000604743 FEVQ99581 238 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 CDADC1Q9BWV3 514 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 DGCR6LQ9BY27 220 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 RACGAP1Q9H0H5 632 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 ELOVL3Q9HB03 270 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 SLCO1C1Q9NYB5 712 aa12.34□□□□□ -0.43
TUBE1-208ENST00000604743 PDP1Q9P0J1 537 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-208ENST00000604743 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.43
TUBE1-208ENST00000604743 IGLV3-9A0A075B6K5 115 aa12.33□□□□□ -0.44
TUBE1-208ENST00000604743 TCRBV3S1A0A5B6 114 aa12.33□□□□□ -0.44
TUBE1-208ENST00000604743 VWC2LB2RUY7 222 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms