RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 GJC3Q8NFK1 279 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 DGCR14Q96DF8 476 aaKnown RBP19.84■□□□□ 0.77
IRF3-228ENST00000601291 MAP6Q96JE9 813 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 ELOVL3Q9HB03 270 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 NDUFB11Q9NX14 153 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 RSL24D1Q9UHA3 163 aaKnown RBP19.84■□□□□ 0.77
IRF3-228ENST00000601291 TINAGQ9UJW2 476 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 PIEZO2Q9H5I5 2752 aa19.84■□□□□ 0.77
IRF3-228ENST00000601291 PNMA8CA0A1B0GUJ8 204 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 TNFSF13O75888 250 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 GLI4P10075 376 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 CELP19835 753 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 CEACAM8P31997 349 aaPredicted RBP19.83■□□□□ 0.77
IRF3-228ENST00000601291 GTF2A1P52655 376 aaPredicted RBP19.83■□□□□ 0.77
IRF3-228ENST00000601291 TMBIM6P55061 237 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 CASP6P55212 293 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 PCBD1P61457 104 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 NFATC3Q12968 1075 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 GPR50Q13585 617 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 TIMM50Q3ZCQ8 353 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 LIPNQ5VXI9 398 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 FOXB2Q5VYV0 432 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 KLHL24Q6TFL4 600 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 CFAP77Q6ZQR2 320 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 RHOUQ7L0Q8 258 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 SLC16A14Q7RTX9 510 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 ANKRD13BQ86YJ7 626 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.83■□□□□ 0.77
IRF3-228ENST00000601291 ZFP41Q8N8Y5 198 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 SH3GL3Q99963 347 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 WACQ9BTA9 647 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 SFXN3Q9BWM7 321 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 PLSCR4Q9NRQ2 329 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 CENPMQ9NSP4 180 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 GRIP1Q9Y3R0 1128 aa19.83■□□□□ 0.77
IRF3-228ENST00000601291 ZNF878C9JN71 531 aa19.83■□□□□ 0.76
IRF3-228ENST00000601291 E9PI62 339 aa19.83■□□□□ 0.76
IRF3-228ENST00000601291 RPP14O95059 124 aaKnown RBP19.83■□□□□ 0.76
IRF3-228ENST00000601291 H2BFMP0C1H6 154 aa19.83■□□□□ 0.76
IRF3-228ENST00000601291 TGM4P49221 684 aa19.83■□□□□ 0.76
IRF3-228ENST00000601291 OR7E24Q6IFN5 339 aa19.83■□□□□ 0.76
IRF3-228ENST00000601291 RPL22L1Q6P5R6 122 aaKnown RBP19.83■□□□□ 0.76
IRF3-228ENST00000601291 Q6ZT83 130 aa19.83■□□□□ 0.76
IRF3-228ENST00000601291 RAB2BQ8WUD1 216 aa19.83■□□□□ 0.76
IRF3-228ENST00000601291 ENPP5Q9UJA9 477 aa19.83■□□□□ 0.76
IRF3-228ENST00000601291 LRP12Q9Y561 859 aa19.83■□□□□ 0.76
IRF3-228ENST00000601291 RER1O15258 196 aa19.82■□□□□ 0.76
IRF3-228ENST00000601291 WNT11O96014 354 aa19.82■□□□□ 0.76
IRF3-228ENST00000601291 PSMA1P25786 263 aaKnown RBP19.82■□□□□ 0.76
IRF3-228ENST00000601291 PSMB10P40306 273 aa19.82■□□□□ 0.76
IRF3-228ENST00000601291 SCRN3Q0VDG4 424 aa19.82■□□□□ 0.76
IRF3-228ENST00000601291 BTLAQ7Z6A9 289 aa19.82■□□□□ 0.76
IRF3-228ENST00000601291 SYT9Q86SS6 491 aa19.82■□□□□ 0.76
IRF3-228ENST00000601291 ISOC1Q96CN7 298 aa19.82■□□□□ 0.76
IRF3-228ENST00000601291 STARD4Q96DR4 205 aa19.82■□□□□ 0.76
IRF3-228ENST00000601291 SH3BGRL2Q9UJC5 107 aa19.82■□□□□ 0.76
IRF3-228ENST00000601291 ZNF701M0R085 212 aaPredicted RBP19.81■□□□□ 0.76
IRF3-228ENST00000601291 GABARAPO95166 117 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 CTSSP25774 331 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 OPRL1P41146 370 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 FOXG1P55316 489 aaPredicted RBP19.81■□□□□ 0.76
IRF3-228ENST00000601291 TGFBR3Q03167 851 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 CDK5R1Q15078 307 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 TAF13Q15543 124 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 ZNF544Q6NX49 715 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 ANKRD16Q6P6B7 361 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 ARL9Q6T311 187 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 NAXEQ8NCW5 288 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 FBXO17Q96EF6 278 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 BCL7BQ9BQE9 202 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 NAA50Q9GZZ1 169 aaKnown RBP19.81■□□□□ 0.76
IRF3-228ENST00000601291 ST6GALNAC2Q9UJ37 374 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 MED12LQ86YW9 2145 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 BSNQ9UPA5 3926 aa19.81■□□□□ 0.76
IRF3-228ENST00000601291 SPENQ96T58 3664 aaKnown RBP19.81■□□□□ 0.76
IRF3-228ENST00000601291 PLPP2O43688 288 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 ITGA5P08648 1049 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 CD8BP10966 210 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 CD53P19397 219 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 GADD45AP24522 165 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 GABRA5P31644 462 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 HIST1H3AP68431 136 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 SLC36A2Q495M3 483 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 HIST2H3PS2Q5TEC6 136 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 DMKNQ6E0U4 476 aaPredicted RBP19.8■□□□□ 0.76
IRF3-228ENST00000601291 HIST2H3AQ71DI3 136 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 SKA3Q8IX90 412 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 OR10S1Q8NGN2 331 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 OR1K1Q8NGR3 316 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 SMIM19Q96E16 107 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 NIPAL2Q9H841 368 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 TIMM10BQ9Y5J6 103 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 SIRT4Q9Y6E7 314 aaPredicted RBP19.8■□□□□ 0.76
IRF3-228ENST00000601291 ZZEF1O43149 2961 aa19.8■□□□□ 0.76
IRF3-228ENST00000601291 TRBV2A0A0J9YWF9 115 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 OGG1O15527 345 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 AIREO43918 545 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 IL18BPO95998 194 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 CGAP01215 116 aa19.79■□□□□ 0.76
IRF3-228ENST00000601291 HSD11B1P28845 292 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms