RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 UNQ6126/PRO20091Q6UXV3 157 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 HS3ST5Q8IZT8 346 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 CYB561A3Q8NBI2 242 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 SLC37A3Q8NCC5 494 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 OR2T4Q8NH00 348 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 C18orf12Q96KH6 178 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 DDOQ99489 341 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 BCL2L14Q9BZR8 327 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 DYNLRB1Q9NP97 96 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 NDRG4Q9ULP0 352 aaKnown RBP14.5□□□□□ -0.09
TRIM28-215ENST00000601150 AP4S1Q9Y587 144 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 ACANP16112 2415 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 FAM171A2A8MVW0 826 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 H7C1Q1 480 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 IFNGP01579 166 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 LCKP06239 509 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 GRK5P34947 590 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 HTR5AP47898 357 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 TNK1Q13470 666 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 ATP6AP1Q15904 470 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 MEP1BQ16820 701 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 DNM1P46Q6ZS02 220 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 VASH1Q7L8A9 365 aaPredicted RBP14.49□□□□□ -0.09
TRIM28-215ENST00000601150 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.49□□□□□ -0.09
TRIM28-215ENST00000601150 ATG16L2Q8NAA4 619 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 OR10H5Q8NGA6 315 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 OR1J1Q8NGS3 322 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 SORCS2Q96PQ0 1159 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 SYT3Q9BQG1 590 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 PLEK2Q9NYT0 353 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 DUSP13Q9UII6 198 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 FZR1Q9UM11 496 aa14.49□□□□□ -0.09
TRIM28-215ENST00000601150 RIIAD1A6NNX1 92 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 SYNGR3O43761 229 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 ICMTO60725 284 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 F12P00748 615 aaPredicted RBP14.48□□□□□ -0.09
TRIM28-215ENST00000601150 HLA-DQA2P01906 255 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 TFP02787 698 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 ERCC1P07992 297 aaPredicted RBP14.48□□□□□ -0.09
TRIM28-215ENST00000601150 FCGR1AP12314 374 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 OSMP13725 252 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 FASP25445 335 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 POU1F1P28069 291 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 PYCR1P32322 319 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 WNT5AP41221 380 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 DSCR9P59020 149 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 SELENOVP59797 346 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 TEKQ02763 1124 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 DBPQ10586 325 aaPredicted RBP14.48□□□□□ -0.09
TRIM28-215ENST00000601150 CRMP1Q14194 572 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 SLC27A4Q6P1M0 643 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 ARL9Q6T311 187 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 CLEC2AQ6UVW9 174 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 LRP11Q86VZ4 500 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 C1orf174Q8IYL3 243 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 CIARTQ8N365 385 aaPredicted RBP14.48□□□□□ -0.09
TRIM28-215ENST00000601150 ICA1LQ8NDH6 482 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 PROKR2Q8NFJ6 384 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 GJC3Q8NFK1 279 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 OR5K1Q8NHB7 308 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 SYNPRQ8TBG9 265 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 DNAJC9Q8WXX5 260 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 COX4I2Q96KJ9 171 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 RHNO1Q9BSD3 238 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 RBM4Q9BWF3 364 aaKnown RBP14.48□□□□□ -0.09
TRIM28-215ENST00000601150 RAB1BQ9H0U4 201 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 CMC2Q9NRP2 79 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 KIF17Q9P2E2 1029 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 LHFPL6Q9Y693 200 aa14.48□□□□□ -0.09
TRIM28-215ENST00000601150 A0A1W2PPW3 197 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 M0R233 179 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 RER1O15258 196 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 ADRA2AP08913 450 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 INHBBP09529 407 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 ZNF250P15622 560 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 ZNF3P17036 446 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 SLC25A1P53007 311 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 KLF3P57682 345 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-215ENST00000601150 ERVS71-1P61550 626 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 HIST1H3AP68431 136 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 CCDC92Q53HC0 331 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-215ENST00000601150 HIST2H3PS2Q5TEC6 136 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 HIST2H3AQ71DI3 136 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 HIPK1Q86Z02 1210 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 ZNF101Q8IZC7 436 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 IQCF1Q8N6M8 205 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 OR9Q1Q8NGQ5 310 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 OR1F12Q8NHA8 337 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 C4orf45Q96LM5 186 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 CDADC1Q9BWV3 514 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 ELOVL3Q9HB03 270 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 ATPIF1Q9UII2 106 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 KCNG2Q9UJ96 466 aa14.47□□□□□ -0.09
TRIM28-215ENST00000601150 OR6C6A6NF89 314 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 LY6HO94772 140 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 CSF3P09919 207 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 ZNF823P16415 610 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 PPP1CBP62140 327 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 GINS1Q14691 196 aa14.46□□□□□ -0.09
TRIM28-215ENST00000601150 MAD2L1BPQ15013 274 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms