RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 RERGLQ9H628 205 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 SRA1Q9HD15 236 aaKnown RBP13.52□□□□□ -0.25
RPS28-203ENST00000600659 TBC1D23Q9NUY8 699 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 MRPL22Q9NWU5 206 aaKnown RBP13.52□□□□□ -0.25
RPS28-203ENST00000600659 PDP1Q9P0J1 537 aaPredicted RBP13.52□□□□□ -0.25
RPS28-203ENST00000600659 ASH2LQ9UBL3 628 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 DNAJB9Q9UBS3 223 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 FKBP7Q9Y680 259 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 PMF1-BGLAPU3KQ54 211 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 C5orf49A4QMS7 147 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 C12orf71A8MTZ7 269 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 TIPRLO75663 272 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 CLPTM1O96005 669 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 F12P00748 615 aaPredicted RBP13.51□□□□□ -0.25
RPS28-203ENST00000600659 COX5BP10606 129 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 ZNF250P15622 560 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 GSTM3P21266 225 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 PRKACGP22612 351 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 NUDT6P53370 316 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 PCBD1P61457 104 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 RPS23P62266 143 aaKnown RBP13.51□□□□□ -0.25
RPS28-203ENST00000600659 SCRN3Q0VDG4 424 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 SLC36A3Q495N2 470 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 LYPD4Q6UWN0 246 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 OR1J2Q8NGS2 313 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 SPEF1Q9Y4P9 236 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 C2CD3Q4AC94 2353 aa13.51□□□□□ -0.25
RPS28-203ENST00000600659 SETD2Q9BYW2 2564 aaPredicted RBP13.5□□□□□ -0.25
RPS28-203ENST00000600659 OR6C6A6NF89 314 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 FAM171A2A8MVW0 826 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 RER1O15258 196 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 DOK2O60496 412 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 RENP00797 406 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 NGFP01138 241 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 NOS3P29474 1203 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 GUCA1AP43080 201 aaPredicted RBP13.5□□□□□ -0.25
RPS28-203ENST00000600659 COX10Q12887 443 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 CRMP1Q14194 572 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 MAD2L1BPQ15013 274 aaPredicted RBP13.5□□□□□ -0.25
RPS28-203ENST00000600659 RGS7BPQ6MZT1 257 aaPredicted RBP13.5□□□□□ -0.25
RPS28-203ENST00000600659 DNM1P34Q6PK57 102 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 IQCF1Q8N6M8 205 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 OR2T33Q8NG76 320 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 SLC7A6Q92536 515 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 BCL2L14Q9BZR8 327 aa13.5□□□□□ -0.25
RPS28-203ENST00000600659 RNF223E7ERA6 249 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 SGCEO43556 437 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 BMP4P12644 408 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 CCNOP22674 350 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 PYCR1P32322 319 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 GGT2P36268 569 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 ALDH3B1P43353 468 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 HTR5AP47898 357 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 GDI2P50395 445 aaKnown RBP13.49□□□□□ -0.25
RPS28-203ENST00000600659 KRTAP27-1Q3LI81 207 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 SLC18B1Q6NT16 456 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 FAHD1Q6P587 224 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 SHQ1Q6PI26 577 aaKnown RBP13.49□□□□□ -0.25
RPS28-203ENST00000600659 CORO6Q6QEF8 472 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 BIVMQ86UB2 503 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 MAPK1IP1LQ8NDC0 245 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 OR1J1Q8NGS3 322 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 C10orf105Q8TEF2 133 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 MARS2Q96GW9 593 aaKnown RBP13.49□□□□□ -0.25
RPS28-203ENST00000600659 VRK1Q99986 396 aaPredicted RBP13.49□□□□□ -0.25
RPS28-203ENST00000600659 HCAR1Q9BXC0 346 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 POFUT1Q9H488 388 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 YY1AP1Q9H869 796 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 PNRC2Q9NPJ4 139 aaKnown RBP13.49□□□□□ -0.25
RPS28-203ENST00000600659 BAIAP2Q9UQB8 552 aa13.49□□□□□ -0.25
RPS28-203ENST00000600659 VWC2LB2RUY7 222 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 M0R233 179 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 GNGT2O14610 69 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 SMAD7O15105 426 aaKnown RBP13.48□□□□□ -0.25
RPS28-203ENST00000600659 LCKP06239 509 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 ADRA2AP08913 450 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 DBHP09172 617 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 CLUP10909 449 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 MPV17P39210 176 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 RAD52P43351 418 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 TEKQ02763 1124 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 GLO1Q04760 184 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 ATP6AP1Q15904 470 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 RSPO1Q2MKA7 263 aaPredicted RBP13.48□□□□□ -0.25
RPS28-203ENST00000600659 LINC01590Q5TEZ4 76 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 C1orf146Q5VVC0 180 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 ACSM5Q6NUN0 579 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 CFAP77Q6ZQR2 320 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.48□□□□□ -0.25
RPS28-203ENST00000600659 LINC00346Q8IVM7 164 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 ALDH16A1Q8IZ83 802 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 OR9Q1Q8NGQ5 310 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 SLC25A40Q8TBP6 338 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 GTF3AQ92664 365 aaKnown RBP13.48□□□□□ -0.25
RPS28-203ENST00000600659 REG4Q9BYZ8 158 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 TPK1Q9H3S4 243 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 CMC2Q9NRP2 79 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 PLEK2Q9NYT0 353 aa13.48□□□□□ -0.25
RPS28-203ENST00000600659 CYB5R1Q9UHQ9 305 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms