RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 LOXP28300 417 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 ARR3P36575 388 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 HIST1H3AP68431 136 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 TEX30Q5JUR7 227 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 HIST2H3PS2Q5TEC6 136 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 ZNF774Q6NX45 483 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 HIST2H3AQ71DI3 136 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 SHFQ7M4L6 423 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 FAM169BQ8N8A8 192 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 CPEB3Q8NE35 698 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 MAP6Q96JE9 813 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 ZNF184Q99676 751 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 WACQ9BTA9 647 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 HAO2Q9NYQ3 351 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 KCNG2Q9UJ96 466 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 GDF2Q9UK05 429 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 KLHDC2Q9Y2U9 406 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 TIMM10BQ9Y5J6 103 aa17.4■□□□□ 0.38
SHKBP1-222ENST00000600320 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 CASKO14936 926 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 CECR9P0C854 216 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 HCCSP53701 268 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 PCBD1P61457 104 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 ZNF91Q05481 1191 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 SCRN3Q0VDG4 424 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 CDK5R2Q13319 367 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 SSX8Q7RTT4 187 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 SLC16A9Q7RTY1 509 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 DPY19L4Q7Z388 723 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 THAP5Q7Z6K1 395 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 OR51G2Q8NGK0 314 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 RFKQ969G6 155 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 CDADC1Q9BWV3 514 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 ANKRD60Q9BZ19 345 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 AMBNQ9NP70 447 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 RAB26Q9ULW5 256 aa17.39■□□□□ 0.37
SHKBP1-222ENST00000600320 SERPINA5P05154 406 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 SBK2P0C263 348 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 COX6B1P14854 86 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 MYF6P23409 242 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 TMED1Q13445 227 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 TMEM154Q6P9G4 183 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 VASH1Q7L8A9 365 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 OR10S1Q8NGN2 331 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 OR2AJ1Q8NGZ0 328 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 RNFT2Q96EX2 444 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 PLPPR2Q96GM1 343 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 Q96MT0 163 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 HS3ST6Q96QI5 342 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 AMELYQ99218 206 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 CNN2Q99439 309 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 PNRC2Q9NPJ4 139 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 KCNN3Q9UGI6 736 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 COPS3Q9UNS2 423 aa17.38■□□□□ 0.37
SHKBP1-222ENST00000600320 CYSRT1A8MQ03 144 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 SGCEO43556 437 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 DOK2O60496 412 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 DBTP11182 482 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 PAX7P23759 505 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 CD40P25942 277 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 APEX1P27695 318 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 MTNR1AP48039 350 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 SPOCK1Q08629 439 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 EIF2B1Q14232 305 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 DAZAP2Q15038 168 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 C3orf36Q3SXR2 165 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 BEX5Q5H9J7 111 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 NCMAPQ5T1S8 102 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 DCXRQ7Z4W1 244 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 CDC20BQ86Y33 519 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 GJC3Q8NFK1 279 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 OR4F15Q8NGB8 312 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 OTOSQ8NHW6 89 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 ST7LQ8TDW4 575 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 NGBQ9NPG2 151 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 PLEK2Q9NYT0 353 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 PCDHGB5Q9Y5G0 923 aa17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 SPTAN1Q13813 2472 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-222ENST00000600320 ANKHD1Q8IWZ3 2542 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 SYNGR3O43761 229 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 CCL2P13500 99 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 CALCRP30988 508 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 NAAAQ02083 359 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 BSPH1Q075Z2 132 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 RAB35Q15286 201 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 SLC35F2Q8IXU6 374 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 RFLNBQ8N5W9 214 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 SLC7A6Q92536 515 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 LGALS12Q96DT0 336 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 PIK3IP1Q96FE7 263 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 CNBD2Q96M20 576 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 RHNO1Q9BSD3 238 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 ABHD6Q9BV23 337 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 YIPF3Q9GZM5 350 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 C1orf198Q9H425 327 aa17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 MOV10Q9HCE1 1003 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-222ENST00000600320 LOC100509620A0A075B734 347 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 IQCMA0A1B0GVH7 501 aa17.35■□□□□ 0.37
SHKBP1-222ENST00000600320 OR6C6A6NF89 314 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms