RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 SMAD7O15105 426 aaKnown RBP11.91□□□□□ -0.5
UPF1-205ENST00000598209 SGCEO43556 437 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 INHBBP09529 407 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 COX5BP10606 129 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 PRKACGP22612 351 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 WNT5AP41221 380 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 HTR5AP47898 357 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 EVX1P49640 407 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 ERVS71-1P61550 626 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 GLO1Q04760 184 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 SLC36A3Q495N2 470 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 ZNF362Q5T0B9 420 aaPredicted RBP11.91□□□□□ -0.5
UPF1-205ENST00000598209 DNM1P46Q6ZS02 220 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 LRP11Q86VZ4 500 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 SLC37A3Q8NCC5 494 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 ICA1LQ8NDH6 482 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 SLC26A10Q8NG04 563 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 UTP4Q969X6 686 aaKnown RBP11.91□□□□□ -0.5
UPF1-205ENST00000598209 COX4I2Q96KJ9 171 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 DDOQ99489 341 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 BCL2L14Q9BZR8 327 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 ZNF556Q9HAH1 456 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 NTN4Q9HB63 628 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 PLEK2Q9NYT0 353 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 EIF3KQ9UBQ5 218 aaKnown RBP11.91□□□□□ -0.5
UPF1-205ENST00000598209 DUSP13Q9UII6 198 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 KLHL21Q9UJP4 597 aa11.91□□□□□ -0.5
UPF1-205ENST00000598209 NDRG4Q9ULP0 352 aaKnown RBP11.91□□□□□ -0.5
UPF1-205ENST00000598209 EBAG9O00559 213 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 SYNGR3O43761 229 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 LY6HO94772 140 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.5
UPF1-205ENST00000598209 ADRA2AP08913 450 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 ANXA8P13928 327 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 PYCR1P32322 319 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 ARHGDIAP52565 204 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 TEKQ02763 1124 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 CRMP1Q14194 572 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 CCDC92Q53HC0 331 aaPredicted RBP11.9□□□□□ -0.5
UPF1-205ENST00000598209 SHQ1Q6PI26 577 aaKnown RBP11.9□□□□□ -0.5
UPF1-205ENST00000598209 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 VASH1Q7L8A9 365 aaPredicted RBP11.9□□□□□ -0.5
UPF1-205ENST00000598209 ZNF101Q8IZC7 436 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 IQCF1Q8N6M8 205 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 ZNF525Q8N782 197 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 ATG16L2Q8NAA4 619 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 OR10H5Q8NGA6 315 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 OR1J1Q8NGS3 322 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 NRBF2Q96F24 287 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 DUS3LQ96G46 650 aaKnown RBP11.9□□□□□ -0.5
UPF1-205ENST00000598209 RAB1BQ9H0U4 201 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 MYEF2Q9P2K5 600 aaKnown RBP11.9□□□□□ -0.5
UPF1-205ENST00000598209 AP4S1Q9Y587 144 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 LHFPL6Q9Y693 200 aa11.9□□□□□ -0.5
UPF1-205ENST00000598209 A0A1W2PPW3 197 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 RIIAD1A6NNX1 92 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 M0R233 179 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 RER1O15258 196 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 CLPTM1O96005 669 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 IFNGP01579 166 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 HLA-DQA2P01906 255 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 TFP02787 698 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 OSMP13725 252 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 ZNF250P15622 560 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 POU1F1P28069 291 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 GRK5P34947 590 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 ALDH3B1P43353 468 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 KLF3P57682 345 aaPredicted RBP11.89□□□□□ -0.51
UPF1-205ENST00000598209 DSCR9P59020 149 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 SELENOVP59797 346 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 MAD2L1BPQ15013 274 aaPredicted RBP11.89□□□□□ -0.51
UPF1-205ENST00000598209 ATP6AP1Q15904 470 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 CORO6Q6QEF8 472 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 UNQ6126/PRO20091Q6UXV3 157 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 RFPL4BQ6ZWI9 263 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 ZCCHC24Q8N2G6 241 aaKnown RBP11.89□□□□□ -0.51
UPF1-205ENST00000598209 PROKR2Q8NFJ6 384 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 GJC3Q8NFK1 279 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 OR9Q1Q8NGQ5 310 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 OR2T4Q8NH00 348 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 OR5K1Q8NHB7 308 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 SYNPRQ8TBG9 265 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 C4orf45Q96LM5 186 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 SMR3AQ99954 134 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 RHNO1Q9BSD3 238 aa11.89□□□□□ -0.51
UPF1-205ENST00000598209 RBM4Q9BWF3 364 aaKnown RBP11.89□□□□□ -0.51
UPF1-205ENST00000598209 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
UPF1-205ENST00000598209 YLPM1P49750 1951 aaKnown RBP11.88□□□□□ -0.51
UPF1-205ENST00000598209 IGLV3-9A0A075B6K5 115 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 IGHV4-30-2A0A087WSY4 118 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 OR6C6A6NF89 314 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 ICMTO60725 284 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 ABHD16AO95870 558 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 NGFP01138 241 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
UPF1-205ENST00000598209 CSF3P09919 207 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 ZNF3P17036 446 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 FASP25445 335 aa11.88□□□□□ -0.51
UPF1-205ENST00000598209 SLC25A1P53007 311 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms