RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TBCCD1Q9NVR7 557 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 OR5V1Q9UGF6 321 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 IL20RAQ9UHF4 553 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 PPP1R3CQ9UQK1 317 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 LRCH1Q9Y2L9 728 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 HIF3AQ9Y2N7 669 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 NOTCH1P46531 2555 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 MDFIC2A0A1B0GVS7 189 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 OR5F1O95221 314 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 ABHD16AO95870 558 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 SCG5P05408 212 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 COX5BP10606 129 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 TNFRSF1BP20333 461 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 GSTM3P21266 225 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 TNFSF4P23510 183 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 CPT2P23786 658 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 ERFP50548 548 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 MMP16P51512 607 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 PCBD1P61457 104 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 SRSF4Q08170 494 aaKnown RBP8.35□□□□□ -1.07
LIG1-209ENST00000596104 TOP3AQ13472 1001 aaPredicted RBP8.35□□□□□ -1.07
LIG1-209ENST00000596104 VMACQ2NL98 169 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 ALG10Q5BKT4 473 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 SPATC1Q76KD6 591 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 SYT9Q86SS6 491 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 POU5F2Q8N7G0 328 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 LRRC75AQ8NAA5 344 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 NPEPL1Q8NDH3 523 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 RBP7Q96R05 134 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 PDP1Q9P0J1 537 aaPredicted RBP8.35□□□□□ -1.07
LIG1-209ENST00000596104 IL19Q9UHD0 177 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 RIMS3Q9UJD0 308 aa8.35□□□□□ -1.07
LIG1-209ENST00000596104 NDRG4Q9ULP0 352 aaKnown RBP8.35□□□□□ -1.07
LIG1-209ENST00000596104 TRAV40A0A0B4J280 105 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 IGHV2-70DA0A0C4DH43 119 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 A0A1B0GUS0 222 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 C12orf71A8MTZ7 269 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 SURF4O15260 269 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 HOXA3O43365 443 aaPredicted RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 SHOX2O60902 331 aaPredicted RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 VIMP08670 466 aaKnown RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 THRBP10828 461 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 MSR1P21757 451 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 TUBG1P23258 451 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 TAS2R41P59536 307 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 RPL27P61353 136 aaKnown RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 PIN1Q13526 163 aaPredicted RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 DEFB112Q30KQ8 113 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 INTS11Q5TA45 600 aaKnown RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 ARL9Q6T311 187 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 LRRN1Q6UXK5 716 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 MUC20Q8N307 709 aaPredicted RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 OR10A6Q8NH74 314 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 FNDC8Q8TC99 324 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 SLC26A7Q8TE54 656 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 RASSF5Q8WWW0 418 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 RAB40AQ8WXH6 277 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 HAVCR1Q96D42 359 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 CMBLQ96DG6 245 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 OR2V2Q96R30 315 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 SSBP3Q9BWW4 388 aaPredicted RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 POLR2J2Q9GZM3 115 aaKnown RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 POLR2J3Q9H1A7 115 aaKnown RBP8.34□□□□□ -1.07
LIG1-209ENST00000596104 TMEM165Q9HC07 324 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 TMBIM4Q9HC24 238 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 GCM1Q9NP62 436 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 POLE4Q9NR33 117 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 TUBG2Q9NRH3 451 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 STARD10Q9Y365 291 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 SH3GLB1Q9Y371 365 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 NDUFAF1Q9Y375 327 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 MED31Q9Y3C7 131 aa8.34□□□□□ -1.07
LIG1-209ENST00000596104 TANC2Q9HCD6 1990 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 KIR2DS1A0A191URI9 304 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 A0A1W2PPL8 197 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 FAM181BA6NEQ2 426 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 PIP5K1CO60331 668 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 ZNF205O95201 554 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 FSTL3O95633 263 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 KNG1P01042 644 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 RPS2P15880 293 aaKnown RBP8.33□□□□□ -1.08
LIG1-209ENST00000596104 HTR5AP47898 357 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 CTXN1P60606 82 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 RELBQ01201 579 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 FHL1Q13642 323 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 NFYCQ13952 458 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 FAM205BPQ63HN1 556 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 BTNL3Q6UXE8 466 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 RHOUQ7L0Q8 258 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 IGFN1Q86VF2 1251 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 KLBQ86Z14 1044 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 KIR3DL3Q8N743 410 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 OR4F5Q8NH21 305 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 C10orf82Q8WW14 230 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 STON2Q8WXE9 905 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 THOC1Q96FV9 657 aaKnown RBP8.33□□□□□ -1.08
LIG1-209ENST00000596104 MEGF10Q96KG7 1140 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 CITED1Q99966 193 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 WACQ9BTA9 647 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 RABEP2Q9H5N1 569 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms