RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 GK3PQ14409 553 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 CCDC92Q53HC0 331 aaPredicted RBP9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 RGS7BPQ6MZT1 257 aaPredicted RBP9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 RPL13AP3Q6NVV1 102 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 CLEC2AQ6UVW9 174 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 CLEC9AQ6UXN8 241 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 CD300LDQ6UXZ3 194 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 RFPL4BQ6ZWI9 263 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 VASH1Q7L8A9 365 aaPredicted RBP9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 ZBTB46Q86UZ6 589 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 JAZF1Q86VZ6 243 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 HS3ST5Q8IZT8 346 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 LNX2Q8N448 690 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 SLC26A10Q8NG04 563 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 OR10G2Q8NGC3 310 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 OR52L1Q8NGH7 329 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 OR52E2Q8NGJ4 325 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 GIPC3Q8TF64 312 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 ZNRF4Q8WWF5 429 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 FAM168AQ92567 244 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 FEVQ99581 238 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 WACQ9BTA9 647 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 RACGAP1Q9H0H5 632 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 TPK1Q9H3S4 243 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 SRA1Q9HD15 236 aaKnown RBP9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 DYNLRB1Q9NP97 96 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 ASH2LQ9UBL3 628 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 REV1Q9UBZ9 1251 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 LHFPL6Q9Y693 200 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 ARRDC5A6NEK1 342 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 OR6C6A6NF89 314 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 FAM171A2A8MVW0 826 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 VSTM5A8MXK1 200 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 M0R233 179 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 RER1O15258 196 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 SGCEO43556 437 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 SYNGR3O43761 229 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 DOK2O60496 412 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 RENP00797 406 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 NGFP01138 241 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 LCKP06239 509 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 COX5BP10606 129 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 NOS3P29474 1203 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 MPV17P39210 176 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 RAD52P43351 418 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 GDI2P50395 445 aaKnown RBP9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 DSCR9P59020 149 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 HIST1H3AP68431 136 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 CBX1P83916 185 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 SCRN3Q0VDG4 424 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 SPATA46Q5T0L3 261 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 HIST2H3PS2Q5TEC6 136 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 HIST2H3AQ71DI3 136 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 ALDH16A1Q8IZ83 802 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 CYB561A3Q8NBI2 242 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 OR1J1Q8NGS3 322 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 SLC7A6Q92536 515 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 MARS2Q96GW9 593 aaKnown RBP9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 RHNO1Q9BSD3 238 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 TSSK6Q9BXA6 273 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 BCL2L14Q9BZR8 327 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 LRMDAQ9H2I8 198 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 NTN4Q9HB63 628 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 TBC1D23Q9NUY8 699 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 ARMC1Q9NVT9 282 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 MRPL22Q9NWU5 206 aaKnown RBP9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 DUSP13Q9UII6 198 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 FBXO9Q9UK97 447 aaPredicted RBP9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 FKBP7Q9Y680 259 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 CUBNO60494 3623 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 DYSFO75923 2080 aa9.41□□□□□ -0.9
SHKBP1-206ENST00000595523 ATP5HO75947 161 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 NCR1O76036 304 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 CSF3P09919 207 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 NAT2P11245 290 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 PSKH1P11801 424 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 HOXB4P17483 251 aaPredicted RBP9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 HOXB6P17509 224 aaKnown RBP9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 GSTM3P21266 225 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 PYCR1P32322 319 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 GGT2P36268 569 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 HTR5AP47898 357 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 RIPPLY3P57055 190 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 KLF3P57682 345 aaPredicted RBP9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 GLO1Q04760 184 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 COX10Q12887 443 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 ALKBH6Q3KRA9 238 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 SLC36A3Q495N2 470 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 DNM1P34Q6PK57 102 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 CORO6Q6QEF8 472 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 LYPD4Q6UWN0 246 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 IQCF1Q8N6M8 205 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 SLC37A3Q8NCC5 494 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 ICA1LQ8NDH6 482 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 SYNPRQ8TBG9 265 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 SLC25A40Q8TBP6 338 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 GTF3AQ92664 365 aaKnown RBP9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 C4orf45Q96LM5 186 aa9.4□□□□□ -0.9
SHKBP1-206ENST00000595523 RBM4Q9BWF3 364 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms