RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 IL18Q14116 193 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 TRAM1Q15629 374 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 THEM4Q5T1C6 240 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 OTPQ5XKR4 325 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 DMKNQ6E0U4 476 aaPredicted RBP11.72□□□□□ -0.53
VRK3-205ENST00000593919 DNM1P34Q6PK57 102 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 SLC16A9Q7RTY1 509 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 OR6N2Q8NGY6 317 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 SNX33Q8WV41 574 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 ZNF775Q96BV0 537 aaPredicted RBP11.72□□□□□ -0.53
VRK3-205ENST00000593919 ITPKCQ96DU7 683 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 WDYHV1Q96HA8 205 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 RBP7Q96R05 134 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 OR2M2Q96R28 347 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 INTS14Q96SY0 518 aa11.72□□□□□ -0.53
VRK3-205ENST00000593919 MRPL22Q9NWU5 206 aaKnown RBP11.72□□□□□ -0.53
VRK3-205ENST00000593919 PAQR5Q9NXK6 330 aaPredicted RBP11.72□□□□□ -0.53
VRK3-205ENST00000593919 DOCK7Q96N67 2140 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 ICMTO60725 284 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 ZNF432O94892 652 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 PSKH1P11801 424 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 CFL1P23528 166 aaKnown RBP11.71□□□□□ -0.53
VRK3-205ENST00000593919 SELENOPP49908 381 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 GBX2P52951 348 aaPredicted RBP11.71□□□□□ -0.53
VRK3-205ENST00000593919 OR10A3P58181 314 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 CXADRP78310 365 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 RASGEF1BQ0VAM2 473 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 P2RY14Q15391 338 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 HIST3H3Q16695 136 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 MEP1BQ16820 701 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 DPY19L4Q7Z388 723 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 AKAP14Q86UN6 197 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 TMEM123Q8N131 208 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 FNDC9Q8TBE3 224 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 RNF128Q8TEB7 428 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 NSMAFQ92636 917 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 GHSRQ92847 366 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 PELI1Q96FA3 418 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 MCTS1Q9ULC4 181 aaKnown RBP11.71□□□□□ -0.53
VRK3-205ENST00000593919 LHX6Q9UPM6 363 aa11.71□□□□□ -0.53
VRK3-205ENST00000593919 RP1L1Q8IWN7 2480 aaPredicted RBP11.71□□□□□ -0.53
VRK3-205ENST00000593919 ARHGAP21Q5T5U3 1957 aa11.71□□□□□ -0.54
VRK3-205ENST00000593919 A0A087WV48 116 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 SYNGR4O95473 234 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 CPN1P15169 458 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 EDNRAP25101 427 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 NTF4P34130 210 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 PTGS2P35354 604 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 PSMB10P40306 273 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 CAPZA2P47755 286 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 EVX1P49640 407 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 GDI2P50395 445 aaKnown RBP11.7□□□□□ -0.54
VRK3-205ENST00000593919 BLVRAP53004 296 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 CDONQ4KMG0 1287 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 ACSM3Q53FZ2 586 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.7□□□□□ -0.54
VRK3-205ENST00000593919 CDC20BQ86Y33 519 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 SIAH3Q8IW03 269 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 IL17RDQ8NFM7 739 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 MCHR2Q969V1 340 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 ACOXLQ9NUZ1 547 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 LUZP4Q9P127 313 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 ING1Q9UK53 422 aaPredicted RBP11.7□□□□□ -0.54
VRK3-205ENST00000593919 ADAM30Q9UKF2 790 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 CAMK2AQ9UQM7 478 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 SPTA1P02549 2419 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 CENPBD1B2RD01 187 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 PSMD9O00233 223 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 KHDRBS3O75525 346 aaKnown RBP11.7□□□□□ -0.54
VRK3-205ENST00000593919 AQP8O94778 261 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 MPZL1O95297 269 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 SLC2A2P11168 524 aaPredicted RBP11.7□□□□□ -0.54
VRK3-205ENST00000593919 GNALP38405 381 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 ADAM8P78325 824 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 ASAH1Q13510 395 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 CDK5R1Q15078 307 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 PLEKHN1Q494U1 663 aaPredicted RBP11.7□□□□□ -0.54
VRK3-205ENST00000593919 SYS1Q8N2H4 156 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 SLC26A10Q8NG04 563 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 SLX1AQ9BQ83 275 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 GLTPQ9NZD2 209 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 FOXD3Q9UJU5 478 aaPredicted RBP11.7□□□□□ -0.54
VRK3-205ENST00000593919 KLHDC2Q9Y2U9 406 aa11.7□□□□□ -0.54
VRK3-205ENST00000593919 A0A1B0GVC2 190 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 A0A1W2PPK0 400 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 PRR32B1ATL7 298 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 ZNF593O00488 134 aaPredicted RBP11.69□□□□□ -0.54
VRK3-205ENST00000593919 OGG1O15527 345 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 ZNHIT1O43257 154 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 SLC19A2O60779 497 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 QDPRP09417 244 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 ELK1P19419 428 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 CSNK1A1P48729 337 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 SIRPAP78324 504 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 HSF2Q03933 536 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 PHYHD1Q5SRE7 291 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 TRIQKQ629K1 86 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 RPUSD3Q6P087 351 aaKnown RBP11.69□□□□□ -0.54
VRK3-205ENST00000593919 LRFN4Q6PJG9 635 aa11.69□□□□□ -0.54
VRK3-205ENST00000593919 UNQ6494/PRO21346Q6UXR6 183 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms