RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 C4orf45Q96LM5 186 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 ERMAPQ96PL5 475 aaPredicted RBP11.84□□□□□ -0.51
APOC1-208ENST00000592535 WACQ9BTA9 647 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 NUAK2Q9H093 628 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 OR52D1Q9H346 318 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 NARFLQ9H6Q4 476 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 IL1RAPQ9NPH3 570 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.84□□□□□ -0.51
APOC1-208ENST00000592535 LPAR3Q9UBY5 353 aa11.84□□□□□ -0.51
APOC1-208ENST00000592535 NDRG4Q9ULP0 352 aaKnown RBP11.84□□□□□ -0.51
APOC1-208ENST00000592535 TANC2Q9HCD6 1990 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 B2RBV5 119 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 SGCEO43556 437 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 OR10H3O60404 316 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 GPANK1O95872 356 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 IFNA2P01563 188 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 COX5BP10606 129 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 FPR3P25089 353 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 HTR5AP47898 357 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 MMP15P51511 669 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 CDH15P55291 814 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 MRPS11P82912 194 aaKnown RBP11.83□□□□□ -0.52
APOC1-208ENST00000592535 GABPB1Q06547 395 aaPredicted RBP11.83□□□□□ -0.52
APOC1-208ENST00000592535 MOGQ16653 247 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 RFX4Q33E94 735 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 PCGF3Q3KNV8 242 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 FAM120AOSQ5T036 256 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 MBNL2Q5VZF2 373 aaKnown RBP11.83□□□□□ -0.52
APOC1-208ENST00000592535 UNQ6126/PRO20091Q6UXV3 157 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 CYP2R1Q6VVX0 501 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 VASH1Q7L8A9 365 aaPredicted RBP11.83□□□□□ -0.52
APOC1-208ENST00000592535 GLB1L2Q8IW92 636 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 CLDND2Q8NHS1 167 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 BCAS4Q8TDM0 211 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 NSL1Q96IY1 281 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 TSSK2Q96PF2 358 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 ELOVL3Q9HB03 270 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 NKIRAS2Q9NYR9 191 aa11.83□□□□□ -0.52
APOC1-208ENST00000592535 ZSCAN5BA6NJL1 495 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 DCTN6O00399 190 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 WNT9BO14905 357 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 PPIHO43447 177 aaKnown RBP11.82□□□□□ -0.52
APOC1-208ENST00000592535 ABHD16AO95870 558 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 IGHV1-46P01743 117 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 MT-ND5P03915 603 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 SLC6A6P31641 620 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 GSSP48637 474 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 ZNF81P51508 661 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 MNAT1P51948 309 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 ARHGDIAP52565 204 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 TMEM33P57088 247 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 LSM6P62312 80 aaKnown RBP11.82□□□□□ -0.52
APOC1-208ENST00000592535 DBPQ10586 325 aaPredicted RBP11.82□□□□□ -0.52
APOC1-208ENST00000592535 AQP6Q13520 282 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 TSTQ16762 297 aaKnown RBP11.82□□□□□ -0.52
APOC1-208ENST00000592535 C1orf94Q6P1W5 598 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 LINC01356Q8N9X3 169 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 C1orf159Q96HA4 380 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 SAMD8Q96LT4 415 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 RACGAP1Q9H0H5 632 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 POFUT1Q9H488 388 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 PLEK2Q9NYT0 353 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 ACTR3BQ9P1U1 418 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 ASH2LQ9UBL3 628 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 TMCC3Q9ULS5 477 aa11.82□□□□□ -0.52
APOC1-208ENST00000592535 IGLV1-36A0A0B4J1U3 117 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 IGHV1-69-2A0A0G2JMI3 117 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 TCRBV5S2A0A599 114 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 PLSCR5A0PG75 271 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 H3BSA7 217 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 ARPC3O15145 178 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 TPD52L2O43399 206 aaKnown RBP11.81□□□□□ -0.52
APOC1-208ENST00000592535 SPRY3O43610 288 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 GAAP10253 952 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 IFNGR2P38484 337 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 CRYBB2P43320 205 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 CENPAP49450 140 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 KCNMB1Q16558 191 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 MEP1BQ16820 701 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 CR1LQ2VPA4 569 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 CCDC92Q53HC0 331 aaPredicted RBP11.81□□□□□ -0.52
APOC1-208ENST00000592535 AVPI1Q5T686 147 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 PGBD2Q6P3X8 592 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 LEG1Q6P5S2 330 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 ARL9Q6T311 187 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 RINLQ6ZS11 566 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 USP51Q70EK9 711 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 CXXC5Q7LFL8 322 aaKnown RBP11.81□□□□□ -0.52
APOC1-208ENST00000592535 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.81□□□□□ -0.52
APOC1-208ENST00000592535 JAZF1Q86VZ6 243 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 OR4K13Q8NH42 304 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 GNPDA2Q8TDQ7 276 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 SLC7A6Q92536 515 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 NMNAT3Q96T66 252 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 IFT27Q9BW83 186 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 SAP30LQ9HAJ7 183 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 DECR2Q9NUI1 292 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 GRIP1Q9Y3R0 1128 aa11.81□□□□□ -0.52
APOC1-208ENST00000592535 CACNG2Q9Y698 323 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms