RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 POM121L2Q96KW2 1035 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 RAB3IPQ96QF0 476 aaPredicted RBP10.26□□□□□ -0.77
LIG3-213ENST00000590630 RBM4Q9BWF3 364 aaKnown RBP10.26□□□□□ -0.77
LIG3-213ENST00000590630 FN3KQ9H479 309 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 CMC2Q9NRP2 79 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 ASH2LQ9UBL3 628 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 ATPIF1Q9UII2 106 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 NDRG4Q9ULP0 352 aaKnown RBP10.26□□□□□ -0.77
LIG3-213ENST00000590630 LOC100509620A0A075B734 347 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 DOK2O60496 412 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 ICMTO60725 284 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 IGHV4-39P01824 125 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 HLA-DQA2P01906 255 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 ZNF23P17027 643 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 CCNOP22674 350 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 POU1F1P28069 291 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 PPOXP50336 477 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 SLC25A1P53007 311 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 UCP2P55851 309 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 TEKQ02763 1124 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 CRMP1Q14194 572 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 KPNB1Q14974 876 aaKnown RBP10.25□□□□□ -0.77
LIG3-213ENST00000590630 RAB35Q15286 201 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 ZFP1Q6P2D0 407 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 VASH1Q7L8A9 365 aaPredicted RBP10.25□□□□□ -0.77
LIG3-213ENST00000590630 C1orf174Q8IYL3 243 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 SVOPLQ8N434 492 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 PROKR2Q8NFJ6 384 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 GJC3Q8NFK1 279 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 OR10H5Q8NGA6 315 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 LRTOMTQ8WZ04 291 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 CENPNQ96H22 339 aaPredicted RBP10.25□□□□□ -0.77
LIG3-213ENST00000590630 TEX12Q9BXU0 123 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 NMNAT2Q9BZQ4 307 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 PAPOLBQ9NRJ5 636 aaKnown RBP10.25□□□□□ -0.77
LIG3-213ENST00000590630 PLEK2Q9NYT0 353 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 EIF3KQ9UBQ5 218 aaKnown RBP10.25□□□□□ -0.77
LIG3-213ENST00000590630 KCNG2Q9UJ96 466 aa10.25□□□□□ -0.77
LIG3-213ENST00000590630 FAM171A2A8MVW0 826 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 SYNGR3O43761 229 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 GPANK1O95872 356 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 TFP02787 698 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 HMGN1P05114 100 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 FAM157BP0CG42 384 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 PAICSP22234 425 aaKnown RBP10.24□□□□□ -0.77
LIG3-213ENST00000590630 HTR5AP47898 357 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 DAPP51397 102 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 BLVRAP53004 296 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 SELENOVP59797 346 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 HIST1H3AP68431 136 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 CDK5Q00535 292 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 GINS1Q14691 196 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 MEP1BQ16820 701 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 HIST2H3PS2Q5TEC6 136 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 RGS7BPQ6MZT1 257 aaPredicted RBP10.24□□□□□ -0.77
LIG3-213ENST00000590630 ARL9Q6T311 187 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 HIST2H3AQ71DI3 136 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 AMIGO2Q86SJ2 522 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 LURAP1LQ8IV03 231 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 IQCF1Q8N6M8 205 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 PYDC1Q8WXC3 89 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 Q96MF0 132 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 DOK1Q99704 481 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 CDADC1Q9BWV3 514 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 MRPL37Q9BZE1 423 aaKnown RBP10.24□□□□□ -0.77
LIG3-213ENST00000590630 HDHD2Q9H0R4 259 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 GABARAPL1Q9H0R8 117 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 ENOPH1Q9UHY7 261 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 GDF2Q9UK05 429 aaPredicted RBP10.24□□□□□ -0.77
LIG3-213ENST00000590630 LHFPL6Q9Y693 200 aa10.24□□□□□ -0.77
LIG3-213ENST00000590630 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 TMEM129A0AVI4 362 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 OR6C6A6NF89 314 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 RER1O15258 196 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 NDUFS7O75251 213 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 ABHD16AO95870 558 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 LCKP06239 509 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 ERCC1P07992 297 aaPredicted RBP10.23□□□□□ -0.77
LIG3-213ENST00000590630 CD99P14209 185 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 FOSL1P15407 271 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 ZNF250P15622 560 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 ZNF823P16415 610 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 SPI1P17947 270 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 FMO3P31513 532 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 PYCR1P32322 319 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 GGT2P36268 569 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 WNT5AP41221 380 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 EFNA4P52798 201 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 NUDT6P53370 316 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 ESRRGP62508 458 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 DBPQ10586 325 aaPredicted RBP10.23□□□□□ -0.77
LIG3-213ENST00000590630 MSMPQ1L6U9 139 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 CLEC12BQ2HXU8 276 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 CCDC92Q53HC0 331 aaPredicted RBP10.23□□□□□ -0.77
LIG3-213ENST00000590630 OTPQ5XKR4 325 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 KDM4DQ6B0I6 523 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 SLC18B1Q6NT16 456 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 ACSM5Q6NUN0 579 aa10.23□□□□□ -0.77
LIG3-213ENST00000590630 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms