RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RAD23AP54725 363 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 SEC61A1P61619 476 aaKnown RBP5.13□□□□□ -1.59
VPS25-204ENST00000589577 CCL8P80075 99 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 HOXC5Q00444 222 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 PIN1Q13526 163 aaPredicted RBP5.13□□□□□ -1.59
VPS25-204ENST00000589577 DGCR6Q14129 220 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 SLC17A1Q14916 467 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 ATP6AP1Q15904 470 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 FAM69AQ5T7M9 428 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 FOXB2Q5VYV0 432 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 RNF113BQ8IZP6 322 aaKnown RBP5.13□□□□□ -1.59
VPS25-204ENST00000589577 FAM86B1Q8N7N1 296 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 ZIC4Q8N9L1 334 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 ATG16L2Q8NAA4 619 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 PAPD5Q8NDF8 572 aaKnown RBP5.13□□□□□ -1.59
VPS25-204ENST00000589577 ICA1LQ8NDH6 482 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 OR52J3Q8NH60 311 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 OR5K1Q8NHB7 308 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 STK35Q8TDR2 534 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 GIPC3Q8TF64 312 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 TMEM239Q8WW34 195 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 ACOT11Q8WXI4 607 aaPredicted RBP5.13□□□□□ -1.59
VPS25-204ENST00000589577 NRBF2Q96F24 287 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 C7orf34Q96L11 122 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 NAA11Q9BSU3 229 aaPredicted RBP5.13□□□□□ -1.59
VPS25-204ENST00000589577 TMEM43Q9BTV4 400 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 C9orf16Q9BUW7 83 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 ASPNQ9BXN1 380 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 PRRG3Q9BZD7 231 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 NMNAT1Q9HAN9 279 aaPredicted RBP5.13□□□□□ -1.59
VPS25-204ENST00000589577 RNPEPL1Q9HAU8 725 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 OSGIN1Q9UJX0 560 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 FZR1Q9UM11 496 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 POLR3KQ9Y2Y1 108 aaPredicted RBP5.13□□□□□ -1.59
VPS25-204ENST00000589577 TMED7Q9Y3B3 224 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 HDGFL3Q9Y3E1 203 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 BOLA1Q9Y3E2 137 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 U3KQV3 271 aa5.13□□□□□ -1.59
VPS25-204ENST00000589577 TRAV36DV7A0A075B6V5 113 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 TRAV40A0A0B4J280 105 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 IGHV1-69-2A0A0G2JMI3 117 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 VSTM5A8MXK1 200 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 G3V2T6 193 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 C3orf84H3BNL1 204 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 J3KTA2 159 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 KPNA4O00629 521 aaPredicted RBP5.12□□□□□ -1.59
VPS25-204ENST00000589577 DNPH1O43598 174 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 AKAP8O43823 692 aaKnown RBP5.12□□□□□ -1.59
VPS25-204ENST00000589577 EIF1BO60739 113 aaKnown RBP5.12□□□□□ -1.59
VPS25-204ENST00000589577 DIRAS1O95057 198 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 PMS2P2O95744 297 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 MT-ATP6P00846 226 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 IGHMP01871 453 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 MELTFP08582 738 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 IFI30P13284 250 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 CBR1P16152 277 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 HTR2AP28223 471 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 CD80P33681 288 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 CRYBB2P43320 205 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 RAD52P43351 418 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 CRYBA2P53672 197 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 UBE2NP61088 152 aaKnown RBP5.12□□□□□ -1.59
VPS25-204ENST00000589577 SLC35A1P78382 337 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 RIPK1Q13546 671 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 RFX4Q33E94 735 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 ALKBH6Q3KRA9 238 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 ANKDD1AQ495B1 522 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 CASC10Q5T4H9 136 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 C1orf140Q5VVS0 124 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 RPL13AP3Q6NVV1 102 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 BRD3OSQ6XYD6 125 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 Q6YL49 198 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 Q6ZSV7 163 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 HDDC2Q7Z4H3 204 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 NANOGNBQ7Z5D8 188 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 RBM45Q8IUH3 476 aaKnown RBP5.12□□□□□ -1.59
VPS25-204ENST00000589577 OR10G2Q8NGC3 310 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 OR4K5Q8NGD3 323 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 OR52L1Q8NGH7 329 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 OR52E2Q8NGJ4 325 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 MAGEE2Q8TD90 523 aaPredicted RBP5.12□□□□□ -1.59
VPS25-204ENST00000589577 LRTOMTQ8WZ04 291 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 TMEM45BQ96B21 275 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 UPRTQ96BW1 309 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 ITPKCQ96DU7 683 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 SGTBQ96EQ0 304 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 ZNF385AQ96PM9 386 aaKnown RBP5.12□□□□□ -1.59
VPS25-204ENST00000589577 ALKBH3Q96Q83 286 aaPredicted RBP5.12□□□□□ -1.59
VPS25-204ENST00000589577 GAL3ST1Q99999 423 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 OR11A1Q9GZK7 315 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 CRLF2Q9HC73 371 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 NANSQ9NR45 359 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 STX18Q9P2W9 335 aaKnown RBP5.12□□□□□ -1.59
VPS25-204ENST00000589577 RHCGQ9UBD6 479 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 A4GNTQ9UNA3 340 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 PCDHGB5Q9Y5G0 923 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 LYVE1Q9Y5Y7 322 aa5.12□□□□□ -1.59
VPS25-204ENST00000589577 WI2-2373I1.2A0A1W2PRP0 233 aa5.11□□□□□ -1.59
VPS25-204ENST00000589577 ARRDC5A6NEK1 342 aa5.11□□□□□ -1.59
VPS25-204ENST00000589577 SAC3D1A6NKF1 404 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms