RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ZNF486Q96H40 463 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 CELF6Q96J87 481 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 FCRL1Q96LA6 429 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 IL17FQ96PD4 163 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 TUBA1CQ9BQE3 449 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 LAT2Q9GZY6 243 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2AG1Q9H205 316 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 UGT1A10Q9HAW8 530 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 NEK6Q9HC98 313 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 MYOZ1Q9NP98 299 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 EXD2Q9NVH0 621 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 HRASLS2Q9NWW9 162 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 FAM120CQ9NX05 1096 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 EURLQ9NYK6 297 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 YARS2Q9Y2Z4 477 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 PRSS21Q9Y6M0 314 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 OTOGQ6ZRI0 2925 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 MYLKQ15746 1914 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 NUP210LQ5VU65 1888 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 IGLV5-52A0A0A0MRZ9 124 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 A0A1W2PP11 408 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 A0A1W2PPK0 400 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 NKX6-3A6NJ46 265 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 COPEO14579 308 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 XPNPEP2O43895 674 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 EIF4E2O60573 245 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 CCDC22O60826 627 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ATP5LO75964 103 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2B3O76000 313 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 WISP3O95389 354 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC35E2BP0CK96 405 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC35E2P0CK97 266 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 STK19P49842 368 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 RAP1GDS1P52306 607 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 XGP55808 180 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 BRWD1-AS2P59051 145 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 MAB21L1Q13394 359 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 IHHQ14623 411 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 NCF4Q15080 339 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC25A35Q3KQZ1 300 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 C16orf87Q6PH81 154 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 GFRALQ6UXV0 394 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF841Q6ZN19 808 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 TRPM8Q7Z2W7 1104 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 NET1Q7Z628 596 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 MOB3BQ86TA1 216 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 THOC6Q86W42 341 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 DHRSXQ8N5I4 330 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 CLDN19Q8N6F1 224 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 NEXN-AS1Q8NBZ9 246 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC37A2Q8TED4 501 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ANKRD49Q8WVL7 239 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 NDRG1Q92597 394 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ZHX1-C8orf76Q96EF9 292 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ZBED6CLQ96FA7 236 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 TIMD4Q96H15 378 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 URB1-AS1Q96HZ7 61 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 C4orf36Q96KX1 117 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5B2Q96R09 309 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 LGMNQ99538 433 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 TRIM15Q9C019 465 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 C1orf198Q9H425 327 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 DDX31Q9H8H2 851 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 METTL7AQ9H8H3 244 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 FN3KRPQ9HA64 309 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC52A3Q9NQ40 469 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 CUTCQ9NTM9 273 aa1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF346Q9UL40 294 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-211ENST00000584897 NPIPA5A0A0B4J1W7 369 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IGHV5-10-1A0A0J9YXX1 117 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 USP27XA6NNY8 438 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ARHGEF33A8MVX0 844 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 NPIPA5E9PKD4 350 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 WWP2O00308 870 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SCRG1O75711 98 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 DIRAS1O95057 198 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SOD1P00441 154 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MBP02144 154 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SERPINE1P05121 402 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 RPS17P08708 135 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SMIM10L1P0DMW3 83 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LIFP15018 202 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 UGT2B7P16662 529 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PRPS1L1P21108 318 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 EDNRAP25101 427 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GRIA1P42261 906 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CSNK1EP49674 416 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SGSHP51688 502 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PLA2G16P53816 162 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ERVK-16P61578 105 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IRF8Q02556 426 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 DMTNQ08495 405 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MERTKQ12866 999 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FADDQ13158 208 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR1C1Q15619 314 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CHI3L2Q15782 390 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MOGQ16653 247 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF630Q2M218 657 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM44Q2T9K0 475 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms