RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PATE4P0C8F1 98 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 RPS27P42677 84 aaKnown RBP15.99■□□□□ 0.15
RFFL-211ENST00000584541 SLC15A1P46059 708 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 TUBA1BP68363 451 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 TUBA4AP68366 448 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 CORO6Q6QEF8 472 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 AHSA2Q719I0 299 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 TUBA1AQ71U36 451 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 DCXRQ7Z4W1 244 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 ALDH16A1Q8IZ83 802 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 STX19Q8N4C7 294 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 OR52I1Q8NGK6 324 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 THEM6Q8WUY1 208 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 IPCEF1Q8WWN9 437 aaPredicted RBP15.99■□□□□ 0.15
RFFL-211ENST00000584541 GGHQ92820 318 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 MYDGFQ969H8 173 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 COPS4Q9BT78 406 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 MED18Q9BUE0 208 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 ZNF224Q9NZL3 707 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 GDF2Q9UK05 429 aaPredicted RBP15.99■□□□□ 0.15
RFFL-211ENST00000584541 SLC25A15Q9Y619 301 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 IQCMA0A1B0GVH7 501 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 DAPL1A0PJW8 107 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 PTGES3LE9PB15 166 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 SGCEO43556 437 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 PTHP01270 115 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 MMP7P09237 267 aaPredicted RBP15.98■□□□□ 0.15
RFFL-211ENST00000584541 CRHBPP24387 322 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 EEF1B2P24534 225 aaKnown RBP15.98■□□□□ 0.15
RFFL-211ENST00000584541 DCKP27707 260 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 GRNP28799 593 aaKnown RBP15.98■□□□□ 0.15
RFFL-211ENST00000584541 SRSF1Q07955 248 aaKnown RBP eCLIP15.98■□□□□ 0.15
RFFL-211ENST00000584541 TAB1Q15750 504 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 TMEM154Q6P9G4 183 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 MDP1Q86V88 176 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 ACBD7Q8N6N7 88 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 FGFBP3Q8TAT2 258 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 ASB17Q8WXJ9 295 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 MRPL48Q96GC5 212 aaKnown RBP15.98■□□□□ 0.15
RFFL-211ENST00000584541 TMEM80Q96HE8 168 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 TBX5Q99593 518 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 OR2H1Q9GZK4 316 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 FGF20Q9NP95 211 aaPredicted RBP15.98■□□□□ 0.15
RFFL-211ENST00000584541 INPP5EQ9NRR6 644 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 B3GNT2Q9NY97 397 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 PLEK2Q9NYT0 353 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 MYRFQ9Y2G1 1151 aa15.98■□□□□ 0.15
RFFL-211ENST00000584541 KLF2Q9Y5W3 355 aaPredicted RBP15.98■□□□□ 0.15
RFFL-211ENST00000584541 CLEC18AA5D8T8 446 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 TUBAL3A6NHL2 446 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 RER1O15258 196 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 DOK2O60496 412 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 CBR1P16152 277 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 MYL12AP19105 171 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 ALOX5APP20292 161 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 HCCSP53701 268 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 HIST1H3AP68431 136 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 PSG4Q00888 419 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 ST3GAL4Q11206 333 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 RAB35Q15286 201 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 PABPC1L2AQ5JQF8 200 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 HIST2H3PS2Q5TEC6 136 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 ALKBH2Q6NS38 261 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 KCTD18Q6PI47 426 aaPredicted RBP15.97■□□□□ 0.15
RFFL-211ENST00000584541 CLEC18BQ6UXF7 455 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 CFAP77Q6ZQR2 320 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 HIST2H3AQ71DI3 136 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 CLEC18CQ8NCF0 446 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 SMAP2Q8WU79 429 aaPredicted RBP15.97■□□□□ 0.15
RFFL-211ENST00000584541 ZC3HAV1LQ96H79 300 aaKnown RBP15.97■□□□□ 0.15
RFFL-211ENST00000584541 WFIKKN1Q96NZ8 548 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 ABHD6Q9BV23 337 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 HDHD2Q9H0R4 259 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 NGBQ9NPG2 151 aa15.97■□□□□ 0.15
RFFL-211ENST00000584541 CHCHD3Q9NX63 227 aaKnown RBP15.97■□□□□ 0.15
RFFL-211ENST00000584541 DIMT1Q9UNQ2 313 aaKnown RBP15.97■□□□□ 0.15
RFFL-211ENST00000584541 ZNF503-AS2A6NEH8 195 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 ZNF878C9JN71 531 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 J3QRE1 110 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 IGHA1P01876 353 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 PSKH1P11801 424 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 CHN2P52757 468 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 GABARAPL2P60520 117 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 TAF13Q15543 124 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 ELFN2Q5R3F8 820 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 ZNF774Q6NX45 483 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 WFDC8Q8IUA0 241 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 FAM169BQ8N8A8 192 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 AKR7LQ8NHP1 331 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 ST7LQ8TDW4 575 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 SLAMF6Q96DU3 332 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 MAP6Q96JE9 813 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 RHNO1Q9BSD3 238 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 NPDC1Q9NQX5 325 aaPredicted RBP15.96■□□□□ 0.15
RFFL-211ENST00000584541 CENPMQ9NSP4 180 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 FKBP14Q9NWM8 211 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 COPS3Q9UNS2 423 aa15.96■□□□□ 0.15
RFFL-211ENST00000584541 EXOSC1Q9Y3B2 195 aaKnown RBP15.96■□□□□ 0.15
RFFL-211ENST00000584541 A0A1W2PQL4 384 aaPredicted RBP15.95■□□□□ 0.14
RFFL-211ENST00000584541 RGS10O43665 173 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms