RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, human

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SS18-222	ENST00000582792	QDPR	P09417	244 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	RAP2A	P10114	183 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	PRTN3	P24158	256 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	APLNR	P35414	380 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	MMP15	P51511	669 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	GK3P	Q14409	553 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF74	Q16587	644 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	HIST3H3	Q16695	136 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	DOK3	Q7L591	496 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	ZDHHC21	Q8IVQ6	265 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	NKAIN4	Q8IVV8	208 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	SIGLECL1	Q8N7X8	197 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	OR1J1	Q8NGS3	322 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	TMEM239	Q8WW34	195 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	LIPH	Q8WWY8	451 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	CCL17	Q92583	94 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.49	□□□□□ -0.57
SS18-222	ENST00000582792	MAN2C1	Q9NTJ4	1040 aa		11.49	□□□□□ -0.57
SS18-222	ENST00000582792	DHRS12	A0PJE2	317 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	ISPD	A4D126	451 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	DNAJC9-AS1	A6NH13	148 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792		J3KTA2	159 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	SPRY3	O43610	288 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	CIB2	O75838	187 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	KRT36	O76013	467 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	CH25H	O95992	272 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	IGHG1	P01857	330 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	MT-ND1	P03886	318 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF84	P51523	738 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	HMGA2	P52926	109 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	DEFA6	Q01524	100 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	SLC3A1	Q07837	685 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	TMEM255A	Q5JRV8	349 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	TREML4	Q6UXN2	200 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.48	□□□□□ -0.57
SS18-222	ENST00000582792	ADGRG5	Q8IZF4	528 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	PAPD5	Q8NDF8	572 aa	Known RBP	11.48	□□□□□ -0.57
SS18-222	ENST00000582792	CPEB3	Q8NE35	698 aa	Known RBP	11.48	□□□□□ -0.57
SS18-222	ENST00000582792	DEFB108B	Q8NET1	73 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	ST7L	Q8TDW4	575 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.48	□□□□□ -0.57
SS18-222	ENST00000582792	MCHR2	Q969V1	340 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	YY1AP1	Q9H869	796 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	ZMAT3	Q9HA38	289 aa	Known RBP	11.48	□□□□□ -0.57
SS18-222	ENST00000582792	NANS	Q9NR45	359 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	UBAP1	Q9NZ09	502 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF229	Q9UJW7	825 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	NUP50	Q9UKX7	468 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	MED31	Q9Y3C7	131 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792		V9GYQ6	96 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	TANC2	Q9HCD6	1990 aa		11.48	□□□□□ -0.57
SS18-222	ENST00000582792	PLSCR5	A0PG75	271 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	ZSCAN5B	A6NJL1	495 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	MGRN1	O60291	552 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	FOXH1	O75593	365 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	ADH4	P08319	380 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	ZFP36	P26651	326 aa	Known RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	GCH1	P30793	250 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	MPV17	P39210	176 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	YAP1	P46937	504 aa	Known RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	UGT2B15	P54855	530 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	CLRN1	P58418	232 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF718	Q3SXZ3	478 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	ANKDD1A	Q495B1	522 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	ARMCX4	Q5H9R4	360 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	SPATA46	Q5T0L3	261 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	MBOAT2	Q6ZWT7	520 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	SPATA24	Q86W54	205 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF101	Q8IZC7	436 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	LRRC18	Q8N456	261 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	LRRC17	Q8N6Y2	441 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	TMEM255B	Q8WV15	326 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	UTP4	Q969X6	686 aa	Known RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	DUS3L	Q96G46	650 aa	Known RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	MARS2	Q96GW9	593 aa	Known RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	C1orf147	Q96MC9	270 aa	Predicted RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	DUX5	Q96PT3	197 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	SEPHS2	Q99611	448 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	GPA33	Q99795	319 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	FUZ	Q9BT04	418 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	C1QTNF5	Q9BXJ0	243 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	MRPL13	Q9BYD1	178 aa	Known RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	EGLN1	Q9GZT9	426 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	UNKL	Q9H9P5	680 aa	Known RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	MEPE	Q9NQ76	525 aa	Predicted RBP	11.47	□□□□□ -0.57
SS18-222	ENST00000582792	PLEK2	Q9NYT0	353 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF69	Q9UC07	566 aa		11.47	□□□□□ -0.57
SS18-222	ENST00000582792		A0A087WUU8	490 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	CENPBD1	B2RD01	187 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	HIST1H2AB	P04908	130 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	ASAH2B	P0C7U1	165 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	CCNO	P22674	350 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	STOM	P27105	288 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	WNT5A	P41221	380 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	ZNF133	P52736	654 aa	Predicted RBP	11.46	□□□□□ -0.57
SS18-222	ENST00000582792	HSF2	Q03933	536 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	PRKCD	Q05655	676 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	PABPC1L2A	Q5JQF8	200 aa		11.46	□□□□□ -0.57
SS18-222	ENST00000582792	KLF17	Q5JT82	389 aa	Predicted RBP	11.46	□□□□□ -0.57

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