RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 Q8N9W7 124 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 INO80EQ8NBZ0 244 aaPredicted RBP1.68□□□□□ -2.14
COPS3-213ENST00000577210 PROKR2Q8NFJ6 384 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 VN1R2Q8NFZ6 395 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 OR4F15Q8NGB8 312 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 OR4A15Q8NGL6 344 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 OR2G3Q8NGZ4 309 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 TOP1MTQ969P6 601 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 ISOC2Q96AB3 205 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 SMIM10Q96HG1 83 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 DNAJC1Q96KC8 554 aaKnown RBP1.68□□□□□ -2.14
COPS3-213ENST00000577210 OPALINQ96PE5 141 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 CSPG4P5Q96PW8 444 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 PLEKHF1Q96S99 279 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 FOXC2Q99958 501 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 SH3GL3Q99963 347 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 OSBPL10Q9BXB5 764 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 GABARAPL3Q9BY60 117 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 SLC17A9Q9BYT1 436 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 STMN4Q9H169 189 aaPredicted RBP1.68□□□□□ -2.14
COPS3-213ENST00000577210 LINC00597Q9H2U6 94 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 GAL3ST2Q9H3Q3 398 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 NXF3Q9H4D5 531 aaKnown RBP1.68□□□□□ -2.14
COPS3-213ENST00000577210 XKR8Q9H6D3 395 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 HAUS4Q9H6D7 363 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 SYNDIG1Q9H7V2 258 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 UGT1A7Q9HAW7 530 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 UGT1A8Q9HAW9 530 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 TMEM165Q9HC07 324 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 SLCO1B3Q9NPD5 702 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 LZTFL1Q9NQ48 299 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 PRSS16Q9NQE7 514 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 CTPS2Q9NRF8 586 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 ZNF226Q9NYT6 803 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 IFNKQ9P0W0 207 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 SHPKQ9UHJ6 478 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 PRO0461Q9UI25 63 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 ST3GAL6Q9Y274 331 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 RCL1Q9Y2P8 373 aaKnown RBP1.68□□□□□ -2.14
COPS3-213ENST00000577210 CEMIPQ8WUJ3 1361 aa1.68□□□□□ -2.14
COPS3-213ENST00000577210 A0A1B0GUH1 482 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 A0A1W2PNU3 283 aaPredicted RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 A0A1W2PRD5 423 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 TSPAN11A1L157 253 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 FAM166BA8MTA8 275 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 NDUFS8O00217 210 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 PEX7O00628 323 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 NUPL2O15504 423 aaKnown RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 SLC19A2O60779 497 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 HSBP1O75506 76 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 MED6O75586 246 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 FARS2O95363 451 aaKnown RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 UTS2O95399 124 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 AIFM1O95831 613 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 HLA-HP01893 362 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 EIF4EP06730 217 aaKnown RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 ZDHHC11BP0C7U3 371 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 UBTFL6P0CB48 400 aaPredicted RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 GKN3PP0CG01 181 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 GGT1P19440 569 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 CSNK2A2P19784 350 aaPredicted RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 CPN2P22792 545 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 CD82P27701 267 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 LONP1P36776 959 aaKnown RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 SERPINB5P36952 375 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 CCR8P51685 355 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 HADHBP55084 474 aaKnown RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 SP4Q02446 784 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 ZNF33AQ06730 810 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 SMARCB1Q12824 385 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 RCAN2Q14206 197 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 KIAA0087Q14695 138 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 ZNF630Q2M218 657 aaPredicted RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 HNRNPA1L2Q32P51 320 aaKnown RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 PTPN20Q4JDL3 420 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 HSP90AA4PQ58FG1 418 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 PIGGQ5H8A4 983 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 MLIPQ5VWP3 458 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 FRMPD2BQ6IN97 320 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 ADNP2Q6IQ32 1131 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 SLC25A25Q6KCM7 469 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 C16orf87Q6PH81 154 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 IL34Q6ZMJ4 242 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 OAFQ86UD1 273 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 ZNF547Q8IVP9 402 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 H1FOOQ8IZA3 346 aaPredicted RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 KIF2BQ8N4N8 673 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 CSGALNACT2Q8N6G5 542 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 TRIML2Q8N7C3 387 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 ARIH2OSQ8N7S6 290 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 SNX31Q8N9S9 440 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 OR5K2Q8NHB8 316 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 ZNF596Q8TC21 504 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 LRRC20Q8TCA0 184 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 CD300LFQ8TDQ1 290 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 LRRC29Q8WV35 223 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 MITD1Q8WV92 249 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 GIMAP1Q8WWP7 306 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 RAB1CQ92928 201 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms