RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 LRCH1Q9Y2L9 728 aa8.44□□□□□ -1.06
NPLOC4-220ENST00000576940 IGHV3-64DA0A0J9YX35 117 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 A0A1W2PRG6 482 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 PRORSD1PA6NEY8 169 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 H0YL77 283 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 M0QX08 132 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 UBDO15205 165 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 CLPXO76031 633 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 OPN1SWP03999 348 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 FUT1P19526 365 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 SLC6A2P23975 617 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 MMP16P51512 607 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 ARHGDIAP52565 204 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 PROK1P58294 105 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 FGF12P61328 243 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 LAPTM4AQ15012 233 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 PDCD1Q15116 288 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 TTMPQ5BVD1 217 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 PAGE3Q5JUK9 113 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 ARMC4Q5T2S8 1044 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 GPR157Q5UAW9 335 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 FAM205BPQ63HN1 556 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 SLC25A47Q6Q0C1 308 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 LYPD2Q6UXB3 125 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 ZNF620Q6ZNG0 422 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 MAVSQ7Z434 540 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 NANOGNBQ7Z5D8 188 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 C1orf174Q8IYL3 243 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 MUC20Q8N307 709 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 FITM2Q8N6M3 262 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 CLDN22Q8N7P3 220 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 ATG16L2Q8NAA4 619 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 GPR32P1Q8NGA4 272 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 MOSPD2Q8NHP6 518 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 VANGL1Q8TAA9 524 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 ADAMTS16Q8TE57 1224 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 NMD3Q96D46 503 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 MAELQ96JY0 434 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 TMEM246Q9BRR3 403 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 ELOVL3Q9HB03 270 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 MEPEQ9NQ76 525 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 MAN2C1Q9NTJ4 1040 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 VAPAQ9P0L0 249 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 MIOXQ9UGB7 285 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 SLC7A7Q9UM01 511 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 ANGPT4Q9Y264 503 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 STARD10Q9Y365 291 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 TIMM10BQ9Y5J6 103 aa8.43□□□□□ -1.06
NPLOC4-220ENST00000576940 CENPBD1B2RD01 187 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 ICMTO60725 284 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 SHOX2O60902 331 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 SCG5P05408 212 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 SFTPBP07988 381 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 KITLGP21583 273 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 PCBP3P57721 371 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 BEAN1Q3B7T3 259 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 LRIF1Q5T3J3 769 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 Q6ZPA2 131 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 ZER1Q7Z7L7 766 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 FUNDC1Q8IVP5 155 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 OR5AS1Q8N127 324 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 TMEM86BQ8N661 226 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 PFN4Q8NHR9 129 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 NEIL1Q96FI4 390 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 FAM71F1Q96KD3 344 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 PRSS27Q9BQR3 290 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 PCGF1Q9BSM1 259 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 CDADC1Q9BWV3 514 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 TMEM38AQ9H6F2 299 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 SSU72Q9NP77 194 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 INIPQ9NRY2 104 aa8.42□□□□□ -1.06
NPLOC4-220ENST00000576940 CENPVL3A0A0U1RRI6 287 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 H3BSA7 217 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 TNFRSF13BO14836 293 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 SURF4O15260 269 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 RGS16O15492 202 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 GPR137BO60478 399 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 SNNO75324 88 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 ABHD16AO95870 558 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 IGHV4-59P01825 116 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 CST2P09228 141 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 GPX2P18283 190 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 PMELP40967 661 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 CD47Q08722 323 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 KRT71Q3SY84 523 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 C1orf94Q6P1W5 598 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 ARL9Q6T311 187 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 Q6ZSV7 163 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 ANKRD42Q8N9B4 389 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 C19orf18Q8NEA5 215 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 C10orf82Q8WW14 230 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 DYRK2Q92630 601 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 PTP4A1Q93096 173 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 HAVCR1Q96D42 359 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 PLEKHA8Q96JA3 519 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 ZNF426Q9BUY5 554 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 C20orf141Q9NUB4 165 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 TBCCD1Q9NVR7 557 aa8.41□□□□□ -1.06
NPLOC4-220ENST00000576940 THAP1Q9NVV9 213 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms