RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CRMP1Q14194 572 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 PTGES3Q15185 160 aaKnown RBP9.55□□□□□ -0.88
CHD3-216ENST00000573936 PABPC1L2AQ5JQF8 200 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 OGFRL1Q5TC84 451 aaPredicted RBP9.55□□□□□ -0.88
CHD3-216ENST00000573936 ARL9Q6T311 187 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 UNQ6126/PRO20091Q6UXV3 157 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 Q71RC1 249 aaPredicted RBP9.55□□□□□ -0.88
CHD3-216ENST00000573936 C1orf174Q8IYL3 243 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 IQCF1Q8N6M8 205 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 GJC3Q8NFK1 279 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 NRG4Q8WWG1 115 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 MS4A3Q96HJ5 214 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 FOXN4Q96NZ1 517 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 C9orf16Q9BUW7 83 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 OR2H1Q9GZK4 316 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 WNT5BQ9H1J7 359 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 FN3KQ9H479 309 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 CXorf56Q9H5V9 222 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 EMC7Q9NPA0 242 aa9.55□□□□□ -0.88
CHD3-216ENST00000573936 EIF3KQ9UBQ5 218 aaKnown RBP9.55□□□□□ -0.88
CHD3-216ENST00000573936 FBXO9Q9UK97 447 aaPredicted RBP9.55□□□□□ -0.88
CHD3-216ENST00000573936 NDRG4Q9ULP0 352 aaKnown RBP9.55□□□□□ -0.88
CHD3-216ENST00000573936 TLN2Q9Y4G6 2542 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 FAM171A2A8MVW0 826 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 SGCEO43556 437 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 SMPD2O60906 423 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 MPZL1O95297 269 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 SNAP29O95721 258 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 DANCRP0C864 163 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 NR4A1P22736 598 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 STOMP27105 288 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 PCSK6P29122 969 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 RAD52P43351 418 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 GDI2P50395 445 aaKnown RBP9.54□□□□□ -0.88
CHD3-216ENST00000573936 RAD23AP54725 363 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 PPP2R2BQ00005 443 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 HGFACQ04756 655 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 SNAPC1Q16533 368 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 LRRC36Q1X8D7 754 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 DEFB113Q30KQ7 82 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 UGT2A3Q6UWM9 527 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 DTX2Q86UW9 622 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 MYPOPQ86VE0 399 aaPredicted RBP9.54□□□□□ -0.88
CHD3-216ENST00000573936 ZNF584Q8IVC4 421 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 MUC15Q8N387 334 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 CBR4Q8N4T8 237 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 SLC26A10Q8NG04 563 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 OR2AJ1Q8NGZ0 328 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 AKR7LQ8NHP1 331 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 EME1Q96AY2 570 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 OTULINQ96BN8 352 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 SLC29A1Q99808 456 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 NMNAT2Q9BZQ4 307 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 ZNF442Q9H7R0 627 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 CA10Q9NS85 328 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 CBLN4Q9NTU7 201 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 PLEK2Q9NYT0 353 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 TVP23BQ9NYZ1 205 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 USE1Q9NZ43 259 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 ATPIF1Q9UII2 106 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 LAMP3Q9UQV4 416 aa9.54□□□□□ -0.88
CHD3-216ENST00000573936 ALPK2Q86TB3 2170 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 ZAR1LA6NP61 321 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 EI24O14681 340 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 DOK2O60496 412 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 MITFO75030 526 aaPredicted RBP9.53□□□□□ -0.88
CHD3-216ENST00000573936 TFP02787 698 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 SPI1P17947 270 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 APEX1P27695 318 aaKnown RBP9.53□□□□□ -0.88
CHD3-216ENST00000573936 PYCR1P32322 319 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 GLRXP35754 106 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 ALDH3A2P51648 485 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 SNTB2Q13425 540 aaKnown RBP9.53□□□□□ -0.88
CHD3-216ENST00000573936 SLC35D3Q5M8T2 416 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 TMEM236Q5W0B7 351 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 KRT80Q6KB66 452 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 ZNF774Q6NX45 483 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 CLEC9AQ6UXN8 241 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 B3GLCTQ6Y288 498 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 ZBTB49Q6ZSB9 765 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 LRRC75A-AS1Q8N1F1 130 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 CPEB3Q8NE35 698 aaKnown RBP9.53□□□□□ -0.88
CHD3-216ENST00000573936 OR9Q1Q8NGQ5 310 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 IPCEF1Q8WWN9 437 aaPredicted RBP9.53□□□□□ -0.88
CHD3-216ENST00000573936 PTP4A1Q93096 173 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 TRMT61AQ96FX7 289 aaKnown RBP9.53□□□□□ -0.88
CHD3-216ENST00000573936 C18orf12Q96KH6 178 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 POM121L2Q96KW2 1035 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 DCLRE1CQ96SD1 692 aaKnown RBP9.53□□□□□ -0.88
CHD3-216ENST00000573936 TRAF4Q9BUZ4 470 aaPredicted RBP9.53□□□□□ -0.88
CHD3-216ENST00000573936 GABARAPL3Q9BY60 117 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 BCL2L14Q9BZR8 327 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 ELOVL3Q9HB03 270 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 ASH2LQ9UBL3 628 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 TMEFF2Q9UIK5 374 aaPredicted RBP9.53□□□□□ -0.88
CHD3-216ENST00000573936 CMAHPQ9Y471 501 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 PMF1-BGLAPU3KQ54 211 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 JMJD1CQ15652 2540 aa9.53□□□□□ -0.88
CHD3-216ENST00000573936 C5orf49A4QMS7 147 aa9.52□□□□□ -0.89
CHD3-216ENST00000573936 OR6C6A6NF89 314 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms