RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CCBE1Q6UXH8 406 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 PLEKHG7Q6ZR37 379 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 RAPH1Q70E73 1250 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 P4HA3Q7Z4N8 544 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 SNX32Q86XE0 403 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 OR4N5Q8IXE1 308 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 UBQLNLQ8IYU4 475 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 LRRC25Q8N386 305 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 DMBX1Q8NFW5 382 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 KBTBD8Q8NFY9 601 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 OR11H4Q8NGC9 324 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 OR52K1Q8NGK4 314 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 KRT35Q92764 455 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 POP5Q969H6 163 aaKnown RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 PPWD1Q96BP3 646 aaKnown RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 C12orf43Q96C57 262 aaKnown RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 OMA1Q96E52 524 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 CNBD2Q96M20 576 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 APOL4Q9BPW4 351 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 DOHHQ9BU89 302 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 SFXN3Q9BWM7 321 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 ANKRD60Q9BZ19 345 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 FRMD8P1Q9BZ68 369 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 LAT2Q9GZY6 243 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 HOXD1Q9GZZ0 328 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 SPNS1Q9H2V7 528 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 METTL17Q9H7H0 456 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 COPS7BQ9H9Q2 264 aaPredicted RBP4.56□□□□□ -1.68
SF3B3-214ENST00000572365 CXorf21Q9HAI6 301 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 FOLH1BQ9HBA9 442 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 NEK6Q9HC98 313 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 PRTFDC1Q9NRG1 225 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 TAS2R7Q9NYW3 318 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 TXNDC16Q9P2K2 825 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 ASIC3Q9UHC3 531 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 PSME2Q9UL46 239 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 CLEC4AQ9UMR7 237 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 WDR83OSQ9Y284 106 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 TMED3Q9Y3Q3 217 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 CLCA3PQ9Y6N3 262 aa4.56□□□□□ -1.68
SF3B3-214ENST00000572365 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 A0A087X0T9 212 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 EFCAB10A6NFE3 127 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 OR6C65A6NJZ3 312 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 BUB3O43684 328 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 SPOPO43791 374 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 TYROBPO43914 113 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 NOS1APO75052 506 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 TSC22D2O75157 780 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 TRIM3O75382 744 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 PROSCO94903 275 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 IGHV4-38-2P0DP08 117 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 RNH1P13489 461 aaKnown RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 IRF2P14316 349 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 HOXB6P17509 224 aaKnown RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 HNF1AP20823 631 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 USF1P22415 310 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 GAS1P54826 345 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 FBXW4P57775 412 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 B3GALT5-AS1P59052 145 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 RPS15AP62244 130 aaKnown RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 BTN3A2P78410 334 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 CDK10Q15131 360 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 TMED2Q15363 201 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 ODF4Q2M2E3 257 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 SMU1Q2TAY7 513 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 PIGGQ5H8A4 983 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 NHSL2Q5HYW2 709 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 UGT3A1Q6NUS8 523 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 TTC33Q6PID6 262 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 OPN5Q6U736 354 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 CLEC2AQ6UVW9 174 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 ENPP6Q6UWR7 440 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 DGAT2L6Q6ZPD8 337 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 USP43Q70EL4 1123 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 STX12Q86Y82 276 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 PLCZ1Q86YW0 608 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 PRR22Q8IZ63 422 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 CA13Q8N1Q1 262 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 UBE2J2Q8N2K1 259 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 ZCCHC7Q8N3Z6 543 aaKnown RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 NATD1Q8N6N6 113 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 MAPKAPK5-AS1Q8N8E1 139 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 FAM83FQ8NEG4 500 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 C11orf24Q96F05 449 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 FAM71F1Q96KD3 344 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF597Q96LX8 424 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 RILPQ96NA2 401 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 FOPNLQ96NB1 174 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 GAL3ST1Q99999 423 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 KIFC1Q9BW19 673 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 CACNG6Q9BXT2 260 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF717Q9BY31 904 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 AICDAQ9GZX7 198 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 EFCAB1Q9HAE3 211 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 ADAP2Q9NPF8 381 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 SDR39U1Q9NRG7 319 aaPredicted RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 ZFP57Q9NU63 452 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 CCDC59Q9P031 241 aaKnown RBP4.55□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF229Q9UJW7 825 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms