RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 A0A1W2PPL8 197 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 J3QW42 95 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 WIPF1O43516 503 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 SHOX2O60902 331 aaPredicted RBP13.12□□□□□ -0.31
TSR1-202ENST00000571806 KITLGP21583 273 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 PRTN3P24158 256 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 KDELR2P33947 212 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 SLC6A9P48067 706 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 ZNF154Q13106 437 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 CYBRD1Q53TN4 286 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 TTMPQ5BVD1 217 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 TMEM255AQ5JRV8 349 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 DOK3Q7L591 496 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 OAFQ86UD1 273 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 MUC20Q8N307 709 aaPredicted RBP13.12□□□□□ -0.31
TSR1-202ENST00000571806 PCYOX1LQ8NBM8 494 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 FAM156AQ8NDB6 213 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 DEFB108BQ8NET1 73 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 ZNF583Q96ND8 569 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 NDEL1Q9GZM8 345 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 POLE4Q9NR33 117 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 GID8Q9NWU2 228 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 EGFL7Q9UHF1 273 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 A4GNTQ9UNA3 340 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 AP3M1Q9Y2T2 418 aa13.12□□□□□ -0.31
TSR1-202ENST00000571806 A8MXK9 166 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 FAM220BPB1ANY3 271 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 PPIAL4GP0DN37 164 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 ZNF12P17014 697 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 ZFP36P26651 326 aaKnown RBP13.11□□□□□ -0.31
TSR1-202ENST00000571806 BTG1P62324 171 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 PRKCDQ05655 676 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 ENDOGQ14249 297 aaKnown RBP13.11□□□□□ -0.31
TSR1-202ENST00000571806 LRRC23Q53EV4 343 aaPredicted RBP13.11□□□□□ -0.31
TSR1-202ENST00000571806 ESCO2Q56NI9 601 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 SLC27A4Q6P1M0 643 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 LRRC75AQ8NAA5 344 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 OR2Z1Q8NG97 314 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 C22orf15Q8WYQ4 148 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 PTP4A1Q93096 173 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 TPD52L3Q96J77 140 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 DCLRE1CQ96SD1 692 aaKnown RBP13.11□□□□□ -0.31
TSR1-202ENST00000571806 FNDC11Q9BVV2 318 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 GRHPRQ9UBQ7 328 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 IL20RAQ9UHF4 553 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 PPP1R3CQ9UQK1 317 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 PPIAL4AQ9Y536 164 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 INSIG2Q9Y5U4 225 aa13.11□□□□□ -0.31
TSR1-202ENST00000571806 EFCAB9A8MZ26 197 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 FXYD1O00168 92 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 XKRYO14609 159 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 MRASO14807 208 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 SGCEO43556 437 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 PIP5K1CO60331 668 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 MDH2P40926 338 aaKnown RBP13.1□□□□□ -0.31
TSR1-202ENST00000571806 GUCY1A3Q02108 690 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 TRAM2Q15035 370 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 OFCC1Q8IZS5 231 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 CLDN22Q8N7P3 220 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 SIGLECL1Q8N7X8 197 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 OR2T12Q8NG77 320 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 OR51A7Q8NH64 312 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 SLC25A28Q96A46 364 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 HAVCR1Q96D42 359 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 CMBLQ96DG6 245 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 MMP26Q9NRE1 261 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 LRCH1Q9Y2L9 728 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 PCDHGB1Q9Y5G3 927 aa13.1□□□□□ -0.31
TSR1-202ENST00000571806 WNK2Q9Y3S1 2297 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 TRAV27A0A087WT01 109 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 ELOVL7A1L3X0 281 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 POM121CA8CG34 1229 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 CLDN34H7C241 214 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 TMPRSS2O15393 492 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 DOK2O60496 412 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 IFNW1P05000 195 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 RAC2P15153 192 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 RPL4P36578 427 aaKnown RBP13.09□□□□□ -0.31
TSR1-202ENST00000571806 HTR5AP47898 357 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 RGS6P49758 472 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 IL13RA1P78552 427 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 AQP6Q13520 282 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 ZNF771Q7L3S4 317 aaPredicted RBP13.09□□□□□ -0.31
TSR1-202ENST00000571806 RRM2BQ7LG56 351 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 NRMQ8IXM6 262 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 OR5L1Q8NGL2 311 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 ACOT11Q8WXI4 607 aaPredicted RBP13.09□□□□□ -0.31
TSR1-202ENST00000571806 TMEM120AQ9BXJ8 343 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 OR5V1Q9UGF6 321 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 ATPIF1Q9UII2 106 aa13.09□□□□□ -0.31
TSR1-202ENST00000571806 TEX13CA0A0J9YWL9 993 aa13.08□□□□□ -0.32
TSR1-202ENST00000571806 F5H0A9 414 aaPredicted RBP13.08□□□□□ -0.32
TSR1-202ENST00000571806 TRAPPC2LH3BP13 241 aa13.08□□□□□ -0.32
TSR1-202ENST00000571806 FSTL3O95633 263 aa13.08□□□□□ -0.32
TSR1-202ENST00000571806 CD14P08571 375 aa13.08□□□□□ -0.32
TSR1-202ENST00000571806 TROVE2P10155 538 aaKnown RBP eCLIP13.08□□□□□ -0.32
TSR1-202ENST00000571806 MTNR1AP48039 350 aa13.08□□□□□ -0.32
TSR1-202ENST00000571806 LSM6P62312 80 aaKnown RBP13.08□□□□□ -0.32
TSR1-202ENST00000571806 BAMBIQ13145 260 aa13.08□□□□□ -0.32
TSR1-202ENST00000571806 FHL1Q13642 323 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms