RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 RUSC1-AS1Q66K80 236 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 Q6ZR03 302 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 C1orf87Q8N0U7 546 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.44□□□□□ -0.9
CHMP6-202ENST00000571457 NABP1Q96AH0 204 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 MCHR1Q99705 422 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 TMEM246Q9BRR3 403 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 WNT5BQ9H1J7 359 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 DPAGT1Q9H3H5 408 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 C16orf95Q9H693 158 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 TBCCD1Q9NVR7 557 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 ZIM2Q9NZV7 527 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 NDRG4Q9ULP0 352 aaKnown RBP9.44□□□□□ -0.9
CHMP6-202ENST00000571457 UGT2A1Q9Y4X1 527 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 COL7A1Q02388 2944 aa9.44□□□□□ -0.9
CHMP6-202ENST00000571457 TRMUO75648 421 aaKnown RBP9.43□□□□□ -0.9
CHMP6-202ENST00000571457 ZNF205O95201 554 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 IGHV4-59P01825 116 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 LIPFP07098 398 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 CST2P09228 141 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 ASAH2BP0C7U1 165 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 PPIBP23284 216 aaKnown RBP9.43□□□□□ -0.9
CHMP6-202ENST00000571457 SLC6A2P23975 617 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 EPHA3P29320 983 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 RBMXP38159 391 aaKnown RBP9.43□□□□□ -0.9
CHMP6-202ENST00000571457 IER3P46695 156 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 SRP9P49458 86 aaKnown RBP9.43□□□□□ -0.9
CHMP6-202ENST00000571457 STX3Q13277 289 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 ZNF404Q494X3 552 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 CD276Q5ZPR3 534 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 WDR25Q64LD2 544 aaPredicted RBP9.43□□□□□ -0.9
CHMP6-202ENST00000571457 NXNQ6DKJ4 435 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 Q6ZSV7 163 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 LDLRAD3Q86YD5 345 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 ARMC8Q8IUR7 673 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 GOLGA6L1Q8N7Z2 621 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 ATG16L2Q8NAA4 619 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 ASB10Q8WXI3 467 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 GTF2H4Q92759 462 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 HAVCR1Q96D42 359 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 MPP4Q96JB8 637 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 ROPN1BQ9BZX4 212 aaPredicted RBP9.43□□□□□ -0.9
CHMP6-202ENST00000571457 PAIP1Q9H074 479 aaKnown RBP9.43□□□□□ -0.9
CHMP6-202ENST00000571457 ROPN1Q9HAT0 212 aaPredicted RBP9.43□□□□□ -0.9
CHMP6-202ENST00000571457 PNPOQ9NVS9 261 aa9.43□□□□□ -0.9
CHMP6-202ENST00000571457 CENPVL3A0A0U1RRI6 287 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 ZNF879B4DU55 563 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 KPNA4O00629 521 aaPredicted RBP9.42□□□□□ -0.9
CHMP6-202ENST00000571457 HDAC3O15379 428 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 TOX4O94842 621 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 CYB5R3P00387 301 aaPredicted RBP9.42□□□□□ -0.9
CHMP6-202ENST00000571457 F13BP05160 661 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 CFHR2P36980 270 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 NPY4RP50391 375 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 POLR2JP52435 117 aaKnown RBP9.42□□□□□ -0.9
CHMP6-202ENST00000571457 UGT2B15P54855 530 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 PCBP3P57721 371 aaKnown RBP9.42□□□□□ -0.9
CHMP6-202ENST00000571457 GUCY1A3Q02108 690 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 RPL18Q07020 188 aaKnown RBP9.42□□□□□ -0.9
CHMP6-202ENST00000571457 CD47Q08722 323 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 ZNF181Q2M3W8 571 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 METTL11BQ5VVY1 283 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 DHRS7BQ6IAN0 325 aaPredicted RBP9.42□□□□□ -0.9
CHMP6-202ENST00000571457 Q6ZTK2 550 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 GALNT4Q8N4A0 578 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 FNDC8Q8TC99 324 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 C10orf82Q8WW14 230 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 NSMAFQ92636 917 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 CMBLQ96DG6 245 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 WACQ9BTA9 647 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 CDADC1Q9BWV3 514 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 WDR55Q9H6Y2 383 aaPredicted RBP9.42□□□□□ -0.9
CHMP6-202ENST00000571457 SDR39U1Q9NRG7 319 aaPredicted RBP9.42□□□□□ -0.9
CHMP6-202ENST00000571457 INIPQ9NRY2 104 aa9.42□□□□□ -0.9
CHMP6-202ENST00000571457 IGHV1-69DA0A0B4J2H0 117 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 TRAPPC13A5PLN9 417 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 BTBD17A6NE02 478 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 NPIPB13A6NJU9 1138 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 CPSF4LA6NMK7 179 aaKnown RBP9.41□□□□□ -0.9
CHMP6-202ENST00000571457 C12orf71A8MTZ7 269 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 NPIPB4C9JG80 1138 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 H0YL77 283 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 TSPAN9O75954 239 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 IGHV1-69P01742 117 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 SFTPBP07988 381 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 COX5BP10606 129 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 IRF2P14316 349 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 RAC2P15153 192 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 FUT4P22083 530 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 LAP3P28838 519 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 AQP1P29972 269 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 FMODQ06828 376 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 EGR3Q06889 387 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 SCARB2Q14108 478 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 RUNDC3AQ59EK9 446 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 ENTPD8Q5MY95 495 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 ARMC4Q5T2S8 1044 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 DCDC5Q6ZRR9 648 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 SYT9Q86SS6 491 aa9.41□□□□□ -0.9
CHMP6-202ENST00000571457 PNLDC1Q8NA58 520 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms