RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 SSX1Q16384 188 aa8.8□□□□□ -1
GDE1-205ENST00000569899 CDONQ4KMG0 1287 aa8.8□□□□□ -1
GDE1-205ENST00000569899 TSPO2Q5TGU0 170 aa8.8□□□□□ -1
GDE1-205ENST00000569899 ZNF585AQ6P3V2 769 aa8.8□□□□□ -1
GDE1-205ENST00000569899 RPTNQ6XPR3 784 aa8.8□□□□□ -1
GDE1-205ENST00000569899 TMPRSS11AQ6ZMR5 421 aa8.8□□□□□ -1
GDE1-205ENST00000569899 PLEKHG7Q6ZR37 379 aa8.8□□□□□ -1
GDE1-205ENST00000569899 SLC16A12Q6ZSM3 486 aa8.8□□□□□ -1
GDE1-205ENST00000569899 NUFIP2Q7Z417 695 aaKnown RBP8.8□□□□□ -1
GDE1-205ENST00000569899 PKD1L2Q7Z442 2459 aa8.8□□□□□ -1
GDE1-205ENST00000569899 GCNT2Q8N0V5 402 aa8.8□□□□□ -1
GDE1-205ENST00000569899 TEX19Q8NA77 164 aa8.8□□□□□ -1
GDE1-205ENST00000569899 C9orf106Q8NAJ2 232 aa8.8□□□□□ -1
GDE1-205ENST00000569899 OR10H5Q8NGA6 315 aa8.8□□□□□ -1
GDE1-205ENST00000569899 SNRNP40Q96DI7 357 aaKnown RBP8.8□□□□□ -1
GDE1-205ENST00000569899 SLX1AQ9BQ83 275 aa8.8□□□□□ -1
GDE1-205ENST00000569899 FAM192AQ9GZU8 254 aa8.8□□□□□ -1
GDE1-205ENST00000569899 SLCO5A1Q9H2Y9 848 aa8.8□□□□□ -1
GDE1-205ENST00000569899 POLE4Q9NR33 117 aa8.8□□□□□ -1
GDE1-205ENST00000569899 ACOXLQ9NUZ1 547 aa8.8□□□□□ -1
GDE1-205ENST00000569899 LAMP5Q9UJQ1 280 aa8.8□□□□□ -1
GDE1-205ENST00000569899 GRIP1Q9Y3R0 1128 aa8.8□□□□□ -1
GDE1-205ENST00000569899 SHANK1Q9Y566 2161 aa8.8□□□□□ -1
GDE1-205ENST00000569899 E9PI62 339 aa8.8□□□□□ -1
GDE1-205ENST00000569899 LRRTM2O43300 516 aa8.8□□□□□ -1
GDE1-205ENST00000569899 SS18L1O75177 396 aaPredicted RBP8.8□□□□□ -1
GDE1-205ENST00000569899 HRGP04196 525 aa8.8□□□□□ -1
GDE1-205ENST00000569899 ALOX5APP20292 161 aa8.8□□□□□ -1
GDE1-205ENST00000569899 GTF2A1P52655 376 aaPredicted RBP8.8□□□□□ -1
GDE1-205ENST00000569899 ACTA2P62736 377 aa8.8□□□□□ -1
GDE1-205ENST00000569899 ACTG2P63267 376 aa8.8□□□□□ -1
GDE1-205ENST00000569899 EIF2B1Q14232 305 aaKnown RBP8.8□□□□□ -1
GDE1-205ENST00000569899 LIPKQ5VXJ0 399 aa8.8□□□□□ -1
GDE1-205ENST00000569899 CORO6Q6QEF8 472 aa8.8□□□□□ -1
GDE1-205ENST00000569899 FOXL2NBQ6ZUU3 175 aa8.8□□□□□ -1
GDE1-205ENST00000569899 SPATC1Q76KD6 591 aa8.8□□□□□ -1
GDE1-205ENST00000569899 P2RY8Q86VZ1 359 aa8.8□□□□□ -1
GDE1-205ENST00000569899 THEM6Q8WUY1 208 aa8.8□□□□□ -1
GDE1-205ENST00000569899 SNX33Q8WV41 574 aa8.8□□□□□ -1
GDE1-205ENST00000569899 NABP1Q96AH0 204 aa8.8□□□□□ -1
GDE1-205ENST00000569899 APH1AQ96BI3 265 aa8.8□□□□□ -1
GDE1-205ENST00000569899 INTS12Q96CB8 462 aaKnown RBP8.8□□□□□ -1
GDE1-205ENST00000569899 ISOC1Q96CN7 298 aa8.8□□□□□ -1
GDE1-205ENST00000569899 MNTQ99583 582 aa8.8□□□□□ -1
GDE1-205ENST00000569899 RBM24Q9BX46 236 aaKnown RBP8.8□□□□□ -1
GDE1-205ENST00000569899 CRLF2Q9HC73 371 aa8.8□□□□□ -1
GDE1-205ENST00000569899 B3GAT2Q9NPZ5 323 aa8.8□□□□□ -1
GDE1-205ENST00000569899 SLC7A10Q9NS82 523 aa8.8□□□□□ -1
GDE1-205ENST00000569899 ASF1BQ9NVP2 202 aa8.8□□□□□ -1
GDE1-205ENST00000569899 ENPP5Q9UJA9 477 aa8.8□□□□□ -1
GDE1-205ENST00000569899 GNG8Q9UK08 70 aa8.8□□□□□ -1
GDE1-205ENST00000569899 POLR1DQ9Y2S0 133 aa8.8□□□□□ -1
GDE1-205ENST00000569899 ATRXP46100 2492 aa8.8□□□□□ -1
GDE1-205ENST00000569899 H3BS24 57 aa8.79□□□□□ -1
GDE1-205ENST00000569899 CCRL2O00421 344 aa8.79□□□□□ -1
GDE1-205ENST00000569899 GABARAPO95166 117 aa8.79□□□□□ -1
GDE1-205ENST00000569899 ABHD16AO95870 558 aa8.79□□□□□ -1
GDE1-205ENST00000569899 MT-ND5P03915 603 aa8.79□□□□□ -1
GDE1-205ENST00000569899 ABOP16442 354 aa8.79□□□□□ -1
GDE1-205ENST00000569899 GADD45AP24522 165 aa8.79□□□□□ -1
GDE1-205ENST00000569899 RGS6P49758 472 aa8.79□□□□□ -1
GDE1-205ENST00000569899 ZNF84P51523 738 aa8.79□□□□□ -1
GDE1-205ENST00000569899 SIRPAP78324 504 aa8.79□□□□□ -1
GDE1-205ENST00000569899 ROR2Q01974 943 aaKnown RBP8.79□□□□□ -1
GDE1-205ENST00000569899 KLRB1Q12918 225 aa8.79□□□□□ -1
GDE1-205ENST00000569899 LY6DQ14210 128 aa8.79□□□□□ -1
GDE1-205ENST00000569899 GUSBP1Q15486 140 aa8.79□□□□□ -1
GDE1-205ENST00000569899 PCK2Q16822 640 aa8.79□□□□□ -1
GDE1-205ENST00000569899 CEACAM16Q2WEN9 425 aa8.79□□□□□ -1
GDE1-205ENST00000569899 KRTCAP3Q53RY4 240 aa8.79□□□□□ -1
GDE1-205ENST00000569899 ZNF684Q5T5D7 378 aa8.79□□□□□ -1
GDE1-205ENST00000569899 RTL6Q6ICC9 239 aa8.79□□□□□ -1
GDE1-205ENST00000569899 SLC18B1Q6NT16 456 aa8.79□□□□□ -1
GDE1-205ENST00000569899 LRRN1Q6UXK5 716 aa8.79□□□□□ -1
GDE1-205ENST00000569899 DCXRQ7Z4W1 244 aa8.79□□□□□ -1
GDE1-205ENST00000569899 SYS1Q8N2H4 156 aa8.79□□□□□ -1
GDE1-205ENST00000569899 RPRMLQ8N4K4 120 aa8.79□□□□□ -1
GDE1-205ENST00000569899 OR52N5Q8NH56 324 aa8.79□□□□□ -1
GDE1-205ENST00000569899 RPL3LQ92901 407 aaKnown RBP8.79□□□□□ -1
GDE1-205ENST00000569899 PELI1Q96FA3 418 aa8.79□□□□□ -1
GDE1-205ENST00000569899 GMPPAQ96IJ6 420 aaPredicted RBP8.79□□□□□ -1
GDE1-205ENST00000569899 ABHD6Q9BV23 337 aa8.79□□□□□ -1
GDE1-205ENST00000569899 LINC00470Q9BZP3 86 aa8.79□□□□□ -1
GDE1-205ENST00000569899 SLC25A18Q9H1K4 315 aa8.79□□□□□ -1
GDE1-205ENST00000569899 NELFAQ9H3P2 528 aa8.79□□□□□ -1
GDE1-205ENST00000569899 GPR35Q9HC97 309 aa8.79□□□□□ -1
GDE1-205ENST00000569899 GP6Q9HCN6 339 aa8.79□□□□□ -1
GDE1-205ENST00000569899 TRIM36Q9NQ86 728 aa8.79□□□□□ -1
GDE1-205ENST00000569899 NDUFB11Q9NX14 153 aa8.79□□□□□ -1
GDE1-205ENST00000569899 NDUFA13Q9P0J0 144 aa8.79□□□□□ -1
GDE1-205ENST00000569899 RSL24D1Q9UHA3 163 aaKnown RBP8.79□□□□□ -1
GDE1-205ENST00000569899 PRSS50Q9UI38 385 aa8.79□□□□□ -1
GDE1-205ENST00000569899 MRM2Q9UI43 246 aaKnown RBP8.79□□□□□ -1
GDE1-205ENST00000569899 IKZF2Q9UKS7 526 aa8.79□□□□□ -1
GDE1-205ENST00000569899 FAM215AQ9Y5M1 114 aa8.79□□□□□ -1
GDE1-205ENST00000569899 LHFPL6Q9Y693 200 aa8.79□□□□□ -1
GDE1-205ENST00000569899 SIRT4Q9Y6E7 314 aaPredicted RBP8.79□□□□□ -1
GDE1-205ENST00000569899 TMEM14AQ9Y6G1 99 aa8.79□□□□□ -1
GDE1-205ENST00000569899 ACACBO00763 2458 aa8.78□□□□□ -1
GDE1-205ENST00000569899 AHRRA9YTQ3 701 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms