RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 LEF1Q9UJU2 399 aaPredicted RBP4.72□□□□□ -1.65
CDH13-211ENST00000568770 RCE1Q9Y256 329 aa4.72□□□□□ -1.65
CDH13-211ENST00000568770 IGLV3-9A0A075B6K5 115 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 MDFIC2A0A1B0GVS7 189 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 AGAP5A6NIR3 686 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 CGB1A6NKQ9 187 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 FTCDNL1E5RQL4 147 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 PIN1P1O15428 100 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 NPIPB7O75200 414 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 FOXH1O75593 365 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 RAB36O95755 333 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 C1QCP02747 245 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 PRB2P02812 416 aaPredicted RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 PATE4P0C8F1 98 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 GKN3PP0CG01 181 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 IGHV4-38-2P0DP08 117 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 CPA3P15088 417 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 B4GALT1P15291 398 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 ZNF250P15622 560 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 IL7RP16871 459 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 PRPS1L1P21108 318 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 ACAA2P42765 397 aaKnown RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 RPS5P46782 204 aaKnown RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 MTNR1AP48039 350 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 ZNF84P51523 738 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 SELENOVP59797 346 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 ERVS71-1P61550 626 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 SEC61A1P61619 476 aaKnown RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 GLO1Q04760 184 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 HNRNPA0Q13151 305 aaKnown RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 C1DQ13901 141 aaKnown RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 SYPL1Q16563 259 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 UGT3A2Q3SY77 523 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 C6orf136Q5SQH8 315 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 IL23RQ5VWK5 629 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 CARD17Q5XLA6 110 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 ATG16L1Q676U5 607 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 OLFML2AQ68BL7 652 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 WBP2NLQ6ICG8 309 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 OR4F3Q6IEY1 312 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 C8orf74Q6P047 294 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 SYT10Q6XYQ8 523 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 ZNF813Q6ZN06 617 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 MOGAT3Q86VF5 341 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 TMEM123Q8N131 208 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 PARP8Q8N3A8 854 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 CADM2Q8N3J6 435 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 PAQR4Q8N4S7 273 aaPredicted RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 ANKFN1Q8N957 763 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 ANKRD42Q8N9B4 389 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 OR4A15Q8NGL6 344 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 OR4F5Q8NH21 305 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 MFSD8Q8NHS3 518 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 FAM110DQ8TAY7 271 aaPredicted RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 SYNPRQ8TBG9 265 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 ACMSDQ8TDX5 336 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 TRIM44Q96DX7 344 aaPredicted RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 KTI12Q96EK9 354 aaPredicted RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 PPP3R2Q96LZ3 170 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 C3orf30Q96M34 536 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 OXGR1Q96P68 337 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 QTRT1Q9BXR0 403 aaKnown RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 TSPYL1Q9H0U9 437 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 MYLK2Q9H1R3 596 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 DENND2DQ9H6A0 471 aaPredicted RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 TNFRSF19Q9NS68 423 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 SLCO1C1Q9NYB5 712 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 TBK1Q9UHD2 729 aa4.71□□□□□ -1.66
CDH13-211ENST00000568770 UBE2J1Q9Y385 318 aaPredicted RBP4.71□□□□□ -1.66
CDH13-211ENST00000568770 A0A096LPI6 279 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 A0A1W2PPM1 405 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 SLC22A23A1A5C7 686 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 CLPSL1A2RUU4 121 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 HMX3A6NHT5 357 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 G3V4G9 280 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 HMGN4O00479 90 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 ZNF500O60304 480 aaPredicted RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 PLIN3O60664 434 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 GLRA3O75311 464 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 UBL3O95164 117 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 AHSA1O95433 338 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 NGFP01138 241 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 IGHMP01871 453 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 SERPINA5P05154 406 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 CRYBA1P05813 215 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 LCKP06239 509 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 DBIP07108 87 aaKnown RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 CHRNGP07510 517 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 FGF4P08620 206 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 OR8G3PP0DMU2 310 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 G6PDP11413 515 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 CCL2P13500 99 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 PRG2P13727 222 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 SELEP16581 610 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 ZNF12P17014 697 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 RPS4Y1P22090 263 aaKnown RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 UQCRC2P22695 453 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 GTF2E2P29084 291 aaKnown RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 RBMXP38159 391 aaKnown RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 COPZ1P61923 177 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms