RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 EXOSC3Q9NQT5 275 aaKnown RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 VSX1Q9NZR4 365 aaPredicted RBP9.9□□□□□ -0.82
PALB2-206ENST00000568219 PPIL1Q9Y3C6 166 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 SLC22A7Q9Y694 548 aa9.9□□□□□ -0.82
PALB2-206ENST00000568219 C2orf74A8MZ97 194 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 YIF1AO95070 293 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 WNT11O96014 354 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 GDI1P31150 447 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 P2RY2P41231 377 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 ZNF136P52737 540 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 RUNX2Q13950 521 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 PRAMEF8Q5VWM4 474 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 PRAMEF7Q5VXH5 474 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 CARD17Q5XLA6 110 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 UQCC3Q6UW78 93 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 PRSS41Q7RTY9 318 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 LYG2Q86SG7 212 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 ROBO4Q8WZ75 1007 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 KIRREL1Q96J84 757 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 SCGB3A2Q96PL1 93 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 MAP3K3Q99759 626 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 MED9Q9NWA0 146 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 EHFQ9NZC4 300 aa9.9□□□□□ -0.83
PALB2-206ENST00000568219 PDCD11Q14690 1871 aaKnown RBP9.89□□□□□ -0.83
PALB2-206ENST00000568219 PRRT4C9JH25 899 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 TSTD3H0UI37 97 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 YKT6O15498 198 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 DNAJB6O75190 326 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 KAT7O95251 611 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 OR2C1O95371 312 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 IL9P15248 144 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 AKT2P31751 481 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 ASCL1P50553 236 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 PPP2CBP62714 309 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 PPP2CAP67775 309 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 RSU1Q15404 277 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 SPIN3Q5JUX0 258 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 RPL7L1Q6DKI1 246 aaKnown RBP9.89□□□□□ -0.83
PALB2-206ENST00000568219 AVL9Q8NBF6 648 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 TMEM104Q8NE00 496 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 OR2L8Q8NGY9 312 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 OR2AJ1Q8NGZ0 328 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 AKR7LQ8NHP1 331 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 MITD1Q8WV92 249 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 RHOVQ96L33 236 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 SERINC2Q96SA4 455 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 CERS4Q9HA82 394 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 MRPL22Q9NWU5 206 aaKnown RBP9.89□□□□□ -0.83
PALB2-206ENST00000568219 OTOFQ9HC10 1997 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 ACTL6AO96019 429 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 IFNA2P01563 188 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 CD96P40200 585 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 UBE2KP61086 200 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 BATFQ16520 125 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 FNDC9Q8TBE3 224 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 FGF13Q92913 245 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 MEGF10Q96KG7 1140 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 PRSS27Q9BQR3 290 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 PBDC1Q9BVG4 233 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 CPED1A4D0V7 1026 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 MEGF11A6BM72 1044 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 ZNF850A8MQ14 1090 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 NPIPA5E9PKD4 350 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 H0YGG7 62 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 PHOX2AO14813 284 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 MUC1P15941 1255 aaPredicted RBP9.89□□□□□ -0.83
PALB2-206ENST00000568219 ADRA2CP18825 462 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 MPGP29372 298 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 ARF3P61204 181 aaPredicted RBP9.89□□□□□ -0.83
PALB2-206ENST00000568219 SKP2Q13309 424 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 ZNF704Q6ZNC4 412 aaPredicted RBP9.89□□□□□ -0.83
PALB2-206ENST00000568219 NUP54Q7Z3B4 507 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 OR4C3Q8NH37 302 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 NEK7Q8TDX7 302 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 G6PC3Q9BUM1 346 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 RAB33BQ9H082 229 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 NPIPA1Q9UND3 350 aa9.89□□□□□ -0.83
PALB2-206ENST00000568219 KNTC1P50748 2209 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 THBS1P07996 1170 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 ACAA1P09110 424 aaPredicted RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 ZP2Q05996 745 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 MEX3BQ6ZN04 569 aaKnown RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 MDGA2Q7Z553 956 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 ANGPTL5Q86XS5 388 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 WFIKKN2Q8TEU8 576 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 KISS1RQ969F8 398 aaPredicted RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 DCBLD2Q96PD2 775 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 SARGQ9BW04 601 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 PRTFDC1Q9NRG1 225 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 FLRT3Q9NZU0 649 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 MRM2Q9UI43 246 aaKnown RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 DAPP1Q9UN19 280 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 B9D1Q9UPM9 204 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 NPTNQ9Y639 398 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 TRPM6Q9BX84 2022 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 A0A087WZY1 265 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 AK1P00568 194 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 ALOX5APP20292 161 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms