RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	ARF6	P62330	175 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	PSG4	Q00888	419 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	ZNF181	Q2M3W8	571 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	DMRTC1	Q5HYR2	192 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	FAM201A	Q5SY85	155 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	CEP85L	Q5SZL2	805 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	C8orf74	Q6P047	294 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	ULK3	Q6PHR2	472 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	SYT9	Q86SS6	491 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	GOLGA6L1	Q8N7Z2	621 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	PPP1R35	Q8TAP8	253 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	NPRL2	Q8WTW4	380 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	TESC	Q96BS2	214 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	MEGF10	Q96KG7	1140 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	PANX1	Q96RD7	426 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	FMO2	Q99518	471 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	SIAE	Q9HAT2	523 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	ASIC5	Q9NY37	505 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	BTNL2	Q9UIR0	455 aa		11.32	□□□□□ -0.6
SMG1-213	ENST00000567737	SACS	Q9NZJ4	4579 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737		A0A1W2PPM1	405 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	LRRN3	E7EW58	273 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	SASH3	O75995	380 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	ABHD16A	O95870	558 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	MT-ATP6	P00846	226 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	CD28	P10747	220 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	IRF2	P14316	349 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	TUBG1	P23258	451 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	PSMB10	P40306	273 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	SLC35A2	P78381	396 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	DPY19L1	Q2PZI1	675 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	SPANXN4	Q5MJ08	99 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	FAM91A1	Q658Y4	838 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	ZNF621	Q6ZSS3	439 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	MOGAT3	Q86VF5	341 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	CALHM3	Q86XJ0	350 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	DTX3	Q8N9I9	347 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	MUC7	Q8TAX7	377 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	CMBL	Q96DG6	245 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	CCDC115	Q96NT0	180 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	ZNF347	Q96SE7	839 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	TUBG2	Q9NRH3	451 aa		11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	GAR1	Q9NY12	217 aa	Known RBP	11.31	□□□□□ -0.6
SMG1-213	ENST00000567737	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.31	□□□□□ -0.6
SMG1-213	ENST00000567737		A0A0G2JPF8	293 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	TMEM247	A6NEH6	219 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	HNRNPCL2	B2RXH8	293 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	HNRNPCL3	B7ZW38	293 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	RNF13	O43567	381 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	HNRNPCL1	O60812	293 aa	Known RBP	11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	DUS4L	O95620	317 aa	Known RBP	11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	KRT75	O95678	551 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	OPN1SW	P03999	348 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	HNRNPCL4	P0DMR1	293 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	EEF1B2	P24534	225 aa	Known RBP	11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	HTR2A	P28223	471 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	S100A3	P33764	101 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	ERVK-25	P63136	954 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	MRPS34	P82930	218 aa	Known RBP	11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	PCLAF	Q15004	111 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	VMO1	Q7Z5L0	202 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	NUDCD3	Q8IVD9	361 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	PAPD5	Q8NDF8	572 aa	Known RBP	11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	OR10AD1	Q8NGE0	317 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	MZB1	Q8WU39	189 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	SLC38A5	Q8WUX1	472 aa		11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	RCC1L	Q96I51	464 aa	Known RBP	11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	CITED2	Q99967	270 aa	Predicted RBP	11.3	□□□□□ -0.6
SMG1-213	ENST00000567737	IGHV3-64D	A0A0J9YX35	117 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737		A0A1B0GVI7	797 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	ABHD2	P08910	425 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	CDA	P32320	146 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	CDKN2C	P42773	168 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	DSTN	P60981	165 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	NCALD	P61601	193 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	GUCY1A3	Q02108	690 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	HIST3H3	Q16695	136 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	RNF144B	Q7Z419	303 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	IGFN1	Q86VF2	1251 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	OR5AS1	Q8N127	324 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	NOXO1	Q8NFA2	376 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	HAVCR1	Q96D42	359 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	TMEM19	Q96HH6	336 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	TEX37	Q96LM6	180 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	NUF2	Q9BZD4	464 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	OR2H1	Q9GZK4	316 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	WNT5B	Q9H1J7	359 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	POFUT1	Q9H488	388 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	CTSZ	Q9UBR2	303 aa		11.29	□□□□□ -0.6
SMG1-213	ENST00000567737	ELOVL7	A1L3X0	281 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	ADARB2-AS1	A8MUL3	147 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737		E9PBE3	544 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737		H3BUX3	64 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	COPE	O14579	308 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	ETFA	P13804	333 aa		11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	RPL4	P36578	427 aa	Known RBP	11.28	□□□□□ -0.6
SMG1-213	ENST00000567737	CLNS1A	P54105	237 aa	Known RBP	11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms