RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TAF1AQ15573 450 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 MEP1BQ16820 701 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 PARP6Q2NL67 630 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 TYSND1Q2T9J0 566 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 KRTAP13-2Q52LG2 175 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 HSP90AA5PQ58FG0 334 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ACSBG2Q5FVE4 666 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CTSL3PQ5NE16 218 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 KCTD11Q693B1 232 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 RTL6Q6ICC9 239 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ADNP2Q6IQ32 1131 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 PODNL1Q6PEZ8 512 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CNSTQ6PJW8 725 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 WDR74Q6RFH5 385 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 ATRAIDQ6UW56 229 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 LINC00696Q6ZRV3 163 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CENPUQ71F23 418 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 RPS27LQ71UM5 84 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 PRSS41Q7RTY9 318 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 PIWIL3Q7Z3Z3 882 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 PEX26Q7Z412 305 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 GLT6D1Q7Z4J2 308 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SLC13A5Q86YT5 568 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 TMEM126BQ8IUX1 230 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ZNF695Q8IW36 515 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 LRRC8AQ8IWT6 810 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 KATNAL2Q8IYT4 538 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SLC35F6Q8N357 371 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 BBS5Q8N3I7 341 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 TRAM1L1Q8N609 369 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 OTUD6BQ8N6M0 293 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 PRELID2Q8N945 189 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ZNF557Q8N988 423 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 DNAAF3Q8N9W5 541 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SIDT2Q8NBJ9 832 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 OR5T3Q8NGG3 340 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 OR52E1Q8NGJ3 308 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 OR9A4Q8NGU2 314 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 OR4L1Q8NH43 312 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 OR52J3Q8NH60 311 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 EEF1AKMT1Q8WVE0 214 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CHCHD10Q8WYQ3 142 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 STARD8Q92502 1023 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ELMO1Q92556 727 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 NRGNQ92686 78 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 TFGQ92734 400 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 GGHQ92820 318 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 NAT6Q93015 286 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 MAGOHBQ96A72 148 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 PPWD1Q96BP3 646 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 CXorf40BQ96DE9 158 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 DCUN1D1Q96GG9 259 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CNDP1Q96KN2 507 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SPATA13Q96N96 652 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 TSNARE1Q96NA8 513 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 BIRC8Q96P09 236 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ALS2CR12Q96Q35 445 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 PANX2Q96RD6 677 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 LYSMD1Q96S90 227 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 COPS8Q99627 209 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 ZSCAN5AQ9BUG6 496 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 NUDT9Q9BW91 350 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 UCK2Q9BZX2 261 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 AICDAQ9GZX7 198 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 DDX47Q9H0S4 455 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 ATG10Q9H0Y0 220 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 GBA3Q9H227 469 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 OR52A5Q9H2C5 316 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SPNS1Q9H2V7 528 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 RHBGQ9H310 441 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SRMSQ9H3Y6 488 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CLMPQ9H6B4 373 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 COG4Q9H9E3 785 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CAB39LQ9H9S4 337 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 LHX9Q9NQ69 397 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 FBXO8Q9NRD0 319 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 FBXO6Q9NRD1 293 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 ASF1BQ9NVP2 202 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 NLE1Q9NVX2 485 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 STMN3Q9NZ72 180 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 UVRAGQ9P2Y5 699 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CTSFQ9UBX1 484 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 MARCOQ9UEW3 520 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 PSORS1C1Q9UIG5 152 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 CRLS1Q9UJA2 301 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SH3BGRL2Q9UJC5 107 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 PYCARDQ9ULZ3 195 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 FARSAQ9Y285 508 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 ASF1AQ9Y294 204 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 SNX24Q9Y343 169 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 WIF1Q9Y5W5 379 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 MAD1L1Q9Y6D9 718 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 TEX264Q9Y6I9 313 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 INTS1Q8N201 2190 aaKnown RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 ROS1P08922 2347 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 NCKAP5O14513 1909 aa0.95□□□□□ -2.26
SMG1-212ENST00000566328 USP9YO00507 2555 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 USP9XQ93008 2570 aaPredicted RBP0.95□□□□□ -2.26
SMG1-212ENST00000566328 ZANQ9Y493 2812 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms